RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 NR3C1P04150 777 aa4.86□□□□□ -1.63
NCL-210ENST00000494618 RNF224P0DH78 156 aa4.86□□□□□ -1.63
NCL-210ENST00000494618 TNFAIP3P21580 790 aa4.86□□□□□ -1.63
NCL-210ENST00000494618 HSD17B4P51659 736 aa4.86□□□□□ -1.63
NCL-210ENST00000494618 ATP12AP54707 1039 aa4.86□□□□□ -1.63
NCL-210ENST00000494618 CDH8P55286 799 aa4.86□□□□□ -1.63
NCL-210ENST00000494618 ARF3P61204 181 aaPredicted RBP4.86□□□□□ -1.63
NCL-210ENST00000494618 ARF1P84077 181 aaKnown RBP4.86□□□□□ -1.63
NCL-210ENST00000494618 MBTD1Q05BQ5 628 aa4.86□□□□□ -1.63
NCL-210ENST00000494618 GAGE2BQ13066 116 aa4.86□□□□□ -1.63
NCL-210ENST00000494618 GAGE2EQ4V326 116 aa4.86□□□□□ -1.63
NCL-210ENST00000494618 TECRLQ5HYJ1 363 aa4.86□□□□□ -1.63
NCL-210ENST00000494618 GAGE2AQ6NT46 116 aa4.86□□□□□ -1.63
NCL-210ENST00000494618 GALNT5Q7Z7M9 940 aa4.86□□□□□ -1.63
NCL-210ENST00000494618 SMPDL3BQ92485 455 aa4.86□□□□□ -1.63
NCL-210ENST00000494618 PRMT6Q96LA8 375 aaPredicted RBP4.86□□□□□ -1.63
NCL-210ENST00000494618 GFI1Q99684 422 aa4.86□□□□□ -1.63
NCL-210ENST00000494618 DENND2DQ9H6A0 471 aaPredicted RBP4.86□□□□□ -1.63
NCL-210ENST00000494618 APOBEC3GQ9HC16 384 aaKnown RBP4.86□□□□□ -1.63
NCL-210ENST00000494618 DDX43Q9NXZ2 648 aaKnown RBP4.86□□□□□ -1.63
NCL-210ENST00000494618 ZNF624Q9P2J8 865 aaPredicted RBP4.86□□□□□ -1.63
NCL-210ENST00000494618 GAGE2DQ9UEU5 116 aa4.86□□□□□ -1.63
NCL-210ENST00000494618 TMEM8BA6NDV4 472 aa4.85□□□□□ -1.63
NCL-210ENST00000494618 TMEM189-UBE2V1I3L0A0 370 aa4.85□□□□□ -1.63
NCL-210ENST00000494618 ZG16O60844 167 aa4.85□□□□□ -1.63
NCL-210ENST00000494618 WISP2O76076 250 aa4.85□□□□□ -1.63
NCL-210ENST00000494618 CLTBP09497 229 aa4.85□□□□□ -1.63
NCL-210ENST00000494618 GNAZP19086 355 aa4.85□□□□□ -1.63
NCL-210ENST00000494618 DRG2P55039 364 aaKnown RBP4.85□□□□□ -1.63
NCL-210ENST00000494618 HILS1P60008 231 aa4.85□□□□□ -1.63
NCL-210ENST00000494618 UBE2V1Q13404 147 aa4.85□□□□□ -1.63
NCL-210ENST00000494618 ASTE1Q2TB18 679 aaPredicted RBP4.85□□□□□ -1.63
NCL-210ENST00000494618 TMEM30BQ3MIR4 351 aa4.85□□□□□ -1.63
NCL-210ENST00000494618 ZNF876PQ49A33 203 aa4.85□□□□□ -1.63
NCL-210ENST00000494618 CCDC30Q5VVM6 783 aa4.85□□□□□ -1.63
NCL-210ENST00000494618 CFAP77Q6ZQR2 320 aa4.85□□□□□ -1.63
NCL-210ENST00000494618 ZNF534Q76KX8 674 aa4.85□□□□□ -1.63
NCL-210ENST00000494618 CHST9Q7L1S5 443 aa4.85□□□□□ -1.63
NCL-210ENST00000494618 TRPT1Q86TN4 253 aaKnown RBP4.85□□□□□ -1.63
NCL-210ENST00000494618 PTOV1Q86YD1 416 aa4.85□□□□□ -1.63
NCL-210ENST00000494618 CEP97Q8IW35 865 aa4.85□□□□□ -1.63
NCL-210ENST00000494618 ZNF473Q8WTR7 871 aaKnown RBP4.85□□□□□ -1.63
NCL-210ENST00000494618 LGALS12Q96DT0 336 aa4.85□□□□□ -1.63
NCL-210ENST00000494618 SLX1AQ9BQ83 275 aa4.85□□□□□ -1.63
NCL-210ENST00000494618 FTOQ9C0B1 505 aaKnown RBP eCLIP4.85□□□□□ -1.637e-23■■□□□ 12.8
NCL-210ENST00000494618 SEMA6AQ9H2E6 1030 aa4.85□□□□□ -1.63
NCL-210ENST00000494618 SEPT11Q9NVA2 429 aaKnown RBP4.85□□□□□ -1.63
NCL-210ENST00000494618 ITIH6Q6UXX5 1313 aa4.84□□□□□ -1.63
NCL-210ENST00000494618 OR2M5A3KFT3 312 aa4.84□□□□□ -1.63
NCL-210ENST00000494618 APOHP02749 345 aaPredicted RBP4.84□□□□□ -1.63
NCL-210ENST00000494618 MSH3P20585 1137 aa4.84□□□□□ -1.63
NCL-210ENST00000494618 NR0B1P51843 470 aaKnown RBP4.84□□□□□ -1.63
NCL-210ENST00000494618 PMP22Q01453 160 aa4.84□□□□□ -1.63
NCL-210ENST00000494618 TMEM198Q66K66 360 aa4.84□□□□□ -1.63
NCL-210ENST00000494618 FASTKD5Q7L8L6 764 aaKnown RBP4.84□□□□□ -1.63
NCL-210ENST00000494618 WDTC1Q8N5D0 677 aa4.84□□□□□ -1.63
NCL-210ENST00000494618 C1orf131Q8NDD1 294 aaKnown RBP4.84□□□□□ -1.63
NCL-210ENST00000494618 CCDC34Q96HJ3 373 aa4.84□□□□□ -1.63
NCL-210ENST00000494618 DACH2Q96NX9 599 aa4.84□□□□□ -1.63
NCL-210ENST00000494618 SMARCAD1Q9H4L7 1026 aa4.84□□□□□ -1.63
NCL-210ENST00000494618 ECHDC1Q9NTX5 307 aa4.84□□□□□ -1.63
NCL-210ENST00000494618 FBXL17Q9UF56 701 aa4.84□□□□□ -1.63
NCL-210ENST00000494618 TSPYL4Q9UJ04 414 aa4.84□□□□□ -1.63
NCL-210ENST00000494618 ACAD8Q9UKU7 415 aa4.84□□□□□ -1.63
NCL-210ENST00000494618 PNMA2Q9UL42 364 aa4.84□□□□□ -1.63
NCL-210ENST00000494618 C2CD2Q9Y426 696 aa4.84□□□□□ -1.63
NCL-210ENST00000494618 LAS1LQ9Y4W2 734 aaKnown RBP4.84□□□□□ -1.63
NCL-210ENST00000494618 PLK4O00444 970 aa4.83□□□□□ -1.64
NCL-210ENST00000494618 TPPPO94811 219 aa4.83□□□□□ -1.64
NCL-210ENST00000494618 OR2C1O95371 312 aa4.83□□□□□ -1.64
NCL-210ENST00000494618 RB1P06400 928 aa4.83□□□□□ -1.64
NCL-210ENST00000494618 PON1P27169 355 aa4.83□□□□□ -1.64
NCL-210ENST00000494618 CHRNB4P30926 498 aa4.83□□□□□ -1.64
NCL-210ENST00000494618 DCAF7P61962 342 aa4.83□□□□□ -1.64
NCL-210ENST00000494618 PPIGQ13427 754 aaKnown RBP eCLIP4.83□□□□□ -1.64
NCL-210ENST00000494618 FAM109BQ6ICB4 259 aaPredicted RBP4.83□□□□□ -1.64
NCL-210ENST00000494618 KIAA0930Q6ICG6 404 aaPredicted RBP4.83□□□□□ -1.64
NCL-210ENST00000494618 FAM180BQ6P0A1 224 aa4.83□□□□□ -1.64
NCL-210ENST00000494618 ARHGAP11AQ6P4F7 1023 aa4.83□□□□□ -1.64
NCL-210ENST00000494618 RBMS3Q6XE24 437 aaKnown RBP4.83□□□□□ -1.64
NCL-210ENST00000494618 ANO5Q75V66 913 aa4.83□□□□□ -1.64
NCL-210ENST00000494618 ADGRF2Q8IZF7 708 aa4.83□□□□□ -1.64
NCL-210ENST00000494618 ANKRD52Q8NB46 1076 aa4.83□□□□□ -1.64
NCL-210ENST00000494618 SEMA4DQ92854 862 aa4.83□□□□□ -1.64
NCL-210ENST00000494618 DDOQ99489 341 aa4.83□□□□□ -1.64
NCL-210ENST00000494618 DNAJC18Q9H819 358 aa4.83□□□□□ -1.64
NCL-210ENST00000494618 ADPRHL2Q9NX46 363 aa4.83□□□□□ -1.64
NCL-210ENST00000494618 EXO1Q9UQ84 846 aaKnown RBP4.83□□□□□ -1.64
NCL-210ENST00000494618 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.83□□□□□ -1.64
NCL-210ENST00000494618 DUXAA6NLW8 204 aa4.82□□□□□ -1.64
NCL-210ENST00000494618 NDUFS4O43181 175 aa4.82□□□□□ -1.64
NCL-210ENST00000494618 SYNCRIPO60506 623 aaKnown RBP4.82□□□□□ -1.64
NCL-210ENST00000494618 BAIAP3O94812 1187 aa4.82□□□□□ -1.64
NCL-210ENST00000494618 SERPINB2P05120 415 aa4.82□□□□□ -1.64
NCL-210ENST00000494618 SELLP14151 372 aa4.82□□□□□ -1.64
NCL-210ENST00000494618 GABRB1P18505 474 aa4.82□□□□□ -1.64
NCL-210ENST00000494618 PAX3P23760 479 aa4.82□□□□□ -1.64
NCL-210ENST00000494618 MMP15P51511 669 aa4.82□□□□□ -1.64
NCL-210ENST00000494618 ERVK11-1P61568 191 aa4.82□□□□□ -1.64
NCL-210ENST00000494618 SPOCK1Q08629 439 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms