RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 ZNF71Q9NQZ8 489 aaPredicted RBP23.42■■□□□ 1.34
TTC3-224ENST00000494243 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.42■■□□□ 1.34
TTC3-224ENST00000494243 HACD3Q9P035 362 aa23.42■■□□□ 1.34
TTC3-224ENST00000494243 SEMA5BQ9P283 1151 aa23.42■■□□□ 1.34
TTC3-224ENST00000494243 KLHL8Q9P2G9 620 aaPredicted RBP23.42■■□□□ 1.34
TTC3-224ENST00000494243 KIAA0754O94854 1291 aa23.41■■□□□ 1.34
TTC3-224ENST00000494243 NDUFA10O95299 355 aa23.41■■□□□ 1.34
TTC3-224ENST00000494243 NELFEP18615 380 aaKnown RBP23.41■■□□□ 1.34
TTC3-224ENST00000494243 DLSTP36957 453 aa23.41■■□□□ 1.34
TTC3-224ENST00000494243 MARCKSL1P49006 195 aa23.41■■□□□ 1.34
TTC3-224ENST00000494243 LDLRAP1Q5SW96 308 aa23.41■■□□□ 1.34
TTC3-224ENST00000494243 IRGCQ6NXR0 463 aa23.41■■□□□ 1.34
TTC3-224ENST00000494243 CNGA4Q8IV77 575 aa23.41■■□□□ 1.34
TTC3-224ENST00000494243 KATNAL2Q8IYT4 538 aa23.41■■□□□ 1.34
TTC3-224ENST00000494243 IPMKQ8NFU5 416 aa23.41■■□□□ 1.34
TTC3-224ENST00000494243 GPR150Q8NGU9 434 aa23.41■■□□□ 1.34
TTC3-224ENST00000494243 C9orf43Q8TAL5 461 aaPredicted RBP23.41■■□□□ 1.34
TTC3-224ENST00000494243 BLOC1S5Q8TDH9 187 aa23.41■■□□□ 1.34
TTC3-224ENST00000494243 COL26A1Q96A83 441 aa23.41■■□□□ 1.34
TTC3-224ENST00000494243 HAUS1Q96CS2 278 aa23.41■■□□□ 1.34
TTC3-224ENST00000494243 ABHD17AQ96GS6 310 aa23.41■■□□□ 1.34
TTC3-224ENST00000494243 EPN3Q9H201 632 aa23.41■■□□□ 1.34
TTC3-224ENST00000494243 CROTQ9UKG9 612 aa23.41■■□□□ 1.34
TTC3-224ENST00000494243 GLYATL1P3A0A0U1RQE8 302 aa23.4■■□□□ 1.34
TTC3-224ENST00000494243 SPAG6O75602 509 aa23.4■■□□□ 1.34
TTC3-224ENST00000494243 ZRANB2O95218 330 aaKnown RBP eCLIP23.4■■□□□ 1.34
TTC3-224ENST00000494243 HLA-DPA1P20036 260 aa23.4■■□□□ 1.34
TTC3-224ENST00000494243 PTMSP20962 102 aa23.4■■□□□ 1.34
TTC3-224ENST00000494243 FECHP22830 423 aa23.4■■□□□ 1.34
TTC3-224ENST00000494243 HALP42357 657 aa23.4■■□□□ 1.34
TTC3-224ENST00000494243 MPP3Q13368 585 aa23.4■■□□□ 1.34
TTC3-224ENST00000494243 PTPRCAPQ14761 206 aa23.4■■□□□ 1.34
TTC3-224ENST00000494243 RPE65Q16518 533 aa23.4■■□□□ 1.34
TTC3-224ENST00000494243 GPRC6AQ5T6X5 926 aa23.4■■□□□ 1.34
TTC3-224ENST00000494243 TMEM220Q6QAJ8 160 aa23.4■■□□□ 1.34
TTC3-224ENST00000494243 GLT6D1Q7Z4J2 308 aa23.4■■□□□ 1.34
TTC3-224ENST00000494243 RASGRP3Q8IV61 690 aa23.4■■□□□ 1.34
TTC3-224ENST00000494243 RCOR2Q8IZ40 523 aa23.4■■□□□ 1.34
TTC3-224ENST00000494243 QKIQ96PU8 341 aaKnown RBP eCLIP23.4■■□□□ 1.343e-11■■■□□ 16.4
TTC3-224ENST00000494243 PSMD13Q9UNM6 376 aa23.4■■□□□ 1.34
TTC3-224ENST00000494243 DNMT3AQ9Y6K1 912 aaPredicted RBP23.4■■□□□ 1.34
TTC3-224ENST00000494243 IGHV5-51A0A0C4DH38 117 aa23.39■■□□□ 1.33
TTC3-224ENST00000494243 AKR1B15C9JRZ8 316 aaPredicted RBP23.39■■□□□ 1.33
TTC3-224ENST00000494243 FURINP09958 794 aa23.39■■□□□ 1.33
TTC3-224ENST00000494243 NFE2L1Q14494 772 aa23.39■■□□□ 1.33
TTC3-224ENST00000494243 PPP2R5EQ16537 467 aa23.39■■□□□ 1.33
TTC3-224ENST00000494243 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.39■■□□□ 1.33
TTC3-224ENST00000494243 SLC41A2Q96JW4 573 aa23.39■■□□□ 1.33
TTC3-224ENST00000494243 GORASP1Q9BQQ3 440 aa23.39■■□□□ 1.33
TTC3-224ENST00000494243 ANP32EQ9BTT0 268 aa23.39■■□□□ 1.33
TTC3-224ENST00000494243 ZCCHC2Q9C0B9 1178 aaKnown RBP23.39■■□□□ 1.33
TTC3-224ENST00000494243 TFR2Q9UP52 801 aa23.39■■□□□ 1.33
TTC3-224ENST00000494243 PKP3Q9Y446 797 aa23.39■■□□□ 1.33
TTC3-224ENST00000494243 KCNMB2Q9Y691 235 aa23.39■■□□□ 1.33
TTC3-224ENST00000494243 HECTD1Q9ULT8 2610 aa23.39■■□□□ 1.33
TTC3-224ENST00000494243 OR2AG2A6NM03 316 aa23.38■■□□□ 1.33
TTC3-224ENST00000494243 HACD1B0YJ81 288 aa23.38■■□□□ 1.33
TTC3-224ENST00000494243 TIAF1O95411 115 aa23.38■■□□□ 1.33
TTC3-224ENST00000494243 CASRP41180 1078 aa23.38■■□□□ 1.33
TTC3-224ENST00000494243 MAGEA1P43355 309 aa23.38■■□□□ 1.33
TTC3-224ENST00000494243 TNNT3P45378 269 aaPredicted RBP23.38■■□□□ 1.33
TTC3-224ENST00000494243 METRNLQ641Q3 311 aa23.38■■□□□ 1.33
TTC3-224ENST00000494243 RNF214Q8ND24 703 aa23.38■■□□□ 1.33
TTC3-224ENST00000494243 STAMBPL1Q96FJ0 436 aa23.38■■□□□ 1.33
TTC3-224ENST00000494243 C10orf88Q9H8K7 445 aa23.38■■□□□ 1.33
TTC3-224ENST00000494243 SMOXQ9NWM0 555 aa23.38■■□□□ 1.33
TTC3-224ENST00000494243 ANAPC2Q9UJX6 822 aa23.38■■□□□ 1.33
TTC3-224ENST00000494243 TRHDEQ9UKU6 1024 aa23.38■■□□□ 1.33
TTC3-224ENST00000494243 AGTP01019 485 aa23.37■■□□□ 1.33
TTC3-224ENST00000494243 FOLR1P15328 257 aa23.37■■□□□ 1.33
TTC3-224ENST00000494243 ITGA9Q13797 1035 aa23.37■■□□□ 1.33
TTC3-224ENST00000494243 SKOR2Q2VWA4 1001 aaPredicted RBP23.37■■□□□ 1.33
TTC3-224ENST00000494243 BBS12Q6ZW61 710 aa23.37■■□□□ 1.33
TTC3-224ENST00000494243 PPP1R3BQ86XI6 285 aa23.37■■□□□ 1.33
TTC3-224ENST00000494243 ZNF398Q8TD17 642 aa23.37■■□□□ 1.33
TTC3-224ENST00000494243 UBXN4Q92575 508 aa23.37■■□□□ 1.33
TTC3-224ENST00000494243 KRT35Q92764 455 aa23.37■■□□□ 1.33
TTC3-224ENST00000494243 TSPY26PQ9H489 355 aa23.37■■□□□ 1.33
TTC3-224ENST00000494243 RSPH14Q9UHP6 348 aa23.37■■□□□ 1.33
TTC3-224ENST00000494243 LNPEPQ9UIQ6 1025 aa23.37■■□□□ 1.33
TTC3-224ENST00000494243 KCTD3Q9Y597 815 aa23.37■■□□□ 1.33
TTC3-224ENST00000494243 PCDHB3Q9Y5E6 796 aa23.37■■□□□ 1.33
TTC3-224ENST00000494243 LCA5LO95447 670 aa23.36■■□□□ 1.33
TTC3-224ENST00000494243 XRCC4Q13426 336 aa23.36■■□□□ 1.33
TTC3-224ENST00000494243 ERV3-1Q14264 604 aa23.36■■□□□ 1.33
TTC3-224ENST00000494243 KCNAB1Q14722 419 aa23.36■■□□□ 1.33
TTC3-224ENST00000494243 CCDC50Q8IVM0 306 aa23.36■■□□□ 1.33
TTC3-224ENST00000494243 BEND7Q8N7W2 519 aaPredicted RBP23.36■■□□□ 1.33
TTC3-224ENST00000494243 TC2NQ8N9U0 490 aa23.36■■□□□ 1.33
TTC3-224ENST00000494243 INSM2Q96T92 566 aaPredicted RBP23.36■■□□□ 1.33
TTC3-224ENST00000494243 MAP3K3Q99759 626 aa23.36■■□□□ 1.33
TTC3-224ENST00000494243 HEMGNQ9BXL5 484 aa23.36■■□□□ 1.33
TTC3-224ENST00000494243 PADI1Q9ULC6 663 aa23.36■■□□□ 1.33
TTC3-224ENST00000494243 PCDHGA6Q9Y5G7 932 aa23.36■■□□□ 1.33
TTC3-224ENST00000494243 ARL5AQ9Y689 179 aa23.36■■□□□ 1.33
TTC3-224ENST00000494243 STX7O15400 261 aaKnown RBP23.35■■□□□ 1.33
TTC3-224ENST00000494243 KATNA1O75449 491 aa23.35■■□□□ 1.33
TTC3-224ENST00000494243 MTHFD1P11586 935 aaKnown RBP23.35■■□□□ 1.33
TTC3-224ENST00000494243 RBL1P28749 1068 aa23.35■■□□□ 1.33
TTC3-224ENST00000494243 PBLDP30039 288 aaPredicted RBP23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms