RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 VPS50Q96JG6 964 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 PAAF1Q9BRP4 392 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 TMEM175Q9BSA9 504 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 HGH1Q9BTY7 390 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 TDRD1Q9BXT4 1180 aaKnown RBP11.36□□□□□ -0.59
RFC4-214ENST00000494047 ZNF576Q9H609 170 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 MAGIXQ9H6Y5 334 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 SLC28A3Q9HAS3 691 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 TMEM161AQ9NX61 479 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 MARCH4Q9P2E8 410 aaPredicted RBP11.36□□□□□ -0.59
RFC4-214ENST00000494047 MAPRE3Q9UPY8 281 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 EIF3LQ9Y262 564 aaKnown RBP11.36□□□□□ -0.59
RFC4-214ENST00000494047 PKP3Q9Y446 797 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 FADS3Q9Y5Q0 445 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 SLC28A1O00337 649 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 BTN3A1O00481 513 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 INPP4BO15327 924 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 STX7O15400 261 aaKnown RBP11.35□□□□□ -0.59
RFC4-214ENST00000494047 RGS14O43566 566 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 MRPS14O60783 128 aaKnown RBP11.35□□□□□ -0.59
RFC4-214ENST00000494047 PRSS23O95084 383 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 KCNH1O95259 989 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 ANXA6P08133 673 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 ACPPP15309 386 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 ZNF12P17014 697 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 ZNF7P17097 686 aaPredicted RBP11.35□□□□□ -0.59
RFC4-214ENST00000494047 JUNBP17275 347 aaPredicted RBP11.35□□□□□ -0.59
RFC4-214ENST00000494047 CR2P20023 1033 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 SLC5A2P31639 672 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 ATP5C1P36542 298 aaKnown RBP11.35□□□□□ -0.59
RFC4-214ENST00000494047 TUFMP49411 452 aaKnown RBP11.35□□□□□ -0.59
RFC4-214ENST00000494047 ALDH3A2P51648 485 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 WDR5P61964 334 aaKnown RBP11.35□□□□□ -0.59
RFC4-214ENST00000494047 LIPEQ05469 1076 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 CHRNB3Q05901 458 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 CACNG1Q06432 222 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 RBBP7Q16576 425 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 TTLL9Q3SXZ7 439 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 BROXQ5VW32 411 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 USP51Q70EK9 711 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 MICAL3Q7RTP6 2002 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 KDELC2Q7Z4H8 507 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 GPR180Q86V85 440 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 PIM3Q86V86 326 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 ABI1Q8IZP0 508 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 TCAIMQ8N3R3 496 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 SFRP1Q8N474 314 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 FNDC5Q8NAU1 212 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 OR9I1Q8NGQ6 314 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 RAB2BQ8WUD1 216 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 GAB3Q8WWW8 586 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 BORCS5Q969J3 196 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 KLHL5Q96PQ7 755 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 SLC29A3Q9BZD2 475 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 GORASP2Q9H8Y8 452 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 HPS4Q9NQG7 708 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 SMOXQ9NWM0 555 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 CMTM6Q9NX76 183 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 CD274Q9NZQ7 290 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 GNPTGQ9UJJ9 305 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 ORC6Q9Y5N6 252 aa11.35□□□□□ -0.59
RFC4-214ENST00000494047 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.34□□□□□ -0.59
RFC4-214ENST00000494047 ATP6AP2A0A1C7CYW4 349 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 TCRBV5S2A0A599 114 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 TRIM64BA6NI03 449 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 SOCS2O14508 198 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 PRMT5O14744 637 aaPredicted RBP11.34□□□□□ -0.59
RFC4-214ENST00000494047 SYNCRIPO60506 623 aaKnown RBP11.34□□□□□ -0.59
RFC4-214ENST00000494047 TLR5O60602 858 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 PFDN1O60925 122 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 ATP6AP2O75787 350 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 CNTN5O94779 1100 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 SCELO95171 688 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 FKBP9O95302 570 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 CPNE6O95741 557 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 IL6P05231 212 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 RHOCP08134 193 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 CBSLP0DN79 551 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 CDK4P11802 303 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 MAPK1P28482 360 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 CBSP35520 551 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 MSX2P35548 267 aaPredicted RBP11.34□□□□□ -0.59
RFC4-214ENST00000494047 AP1S1P61966 158 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 ZNF177Q13360 481 aaPredicted RBP11.34□□□□□ -0.59
RFC4-214ENST00000494047 PWP1Q13610 501 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 MBTPS1Q14703 1052 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 PTPRNQ16849 979 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 PLA2G4EQ3MJ16 856 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 PAN2Q504Q3 1202 aaKnown RBP11.34□□□□□ -0.59
RFC4-214ENST00000494047 CACHD1Q5VU97 1274 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 IL31Q6EBC2 164 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 ZNF773Q6PK81 442 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 PAQR3Q6TCH7 311 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 LAYNQ6UX15 382 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 SPPL2CQ8IUH8 684 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 PGBD5Q8N414 524 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 EFHBQ8N7U6 833 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 ZNF513Q8N8E2 541 aaPredicted RBP11.34□□□□□ -0.59
RFC4-214ENST00000494047 ZNF555Q8NEP9 628 aa11.34□□□□□ -0.59
RFC4-214ENST00000494047 DBF4BQ8NFT6 615 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms