RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 NOVA1P51513 510 aaKnown RBP16.94■□□□□ 0.3
LIME1-208ENST00000493265 GRIK2Q13002 908 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 ZNF449Q6P9G9 518 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 PACS1Q6VY07 963 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 CHST15Q7LFX5 561 aaPredicted RBP16.94■□□□□ 0.3
LIME1-208ENST00000493265 LRRTM4Q86VH4 590 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 PHACTR4Q8IZ21 702 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 KRT222Q8N1A0 295 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 GPATCH11Q8N954 259 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 OR2W6PQ8NHA6 318 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 CPNE1Q99829 537 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 CCDC77Q9BR77 488 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 GTPBP2Q9BX10 602 aaKnown RBP16.94■□□□□ 0.3
LIME1-208ENST00000493265 NUSAP1Q9BXS6 441 aaKnown RBP16.94■□□□□ 0.3
LIME1-208ENST00000493265 FUT8Q9BYC5 575 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 P2RY12Q9H244 342 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 SARS2Q9NP81 518 aaKnown RBP16.94■□□□□ 0.3
LIME1-208ENST00000493265 ARGLU1Q9NWB6 273 aaPredicted RBP16.94■□□□□ 0.3
LIME1-208ENST00000493265 KLF15Q9UIH9 416 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 GNPTGQ9UJJ9 305 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 PLEKHM1Q9Y4G2 1056 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 IKBKGQ9Y6K9 419 aa16.94■□□□□ 0.3
LIME1-208ENST00000493265 TNFRSF10CO14798 259 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 GIPC1O14908 333 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 KHNYNO15037 678 aaKnown RBP16.93■□□□□ 0.3
LIME1-208ENST00000493265 NIPSNAP2O75323 286 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 IVLP07476 585 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 INHBAP08476 426 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 ACP5P13686 325 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 CTSEP14091 401 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 GP5P40197 560 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 MSH2P43246 934 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 IRX4P78413 519 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 IL9RQ01113 521 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 IFFO1Q0D2I5 559 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 NAB1Q13506 487 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 INSCQ1MX18 579 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 CTSL3PQ5NE16 218 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 BEND6Q5SZJ8 279 aaPredicted RBP16.93■□□□□ 0.3
LIME1-208ENST00000493265 RBM20Q5T481 1227 aaKnown RBP16.93■□□□□ 0.3
LIME1-208ENST00000493265 ZNF549Q6P9A3 640 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 SLC23A3Q6PIS1 610 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 NAPRTQ6XQN6 538 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 MREGQ8N565 214 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 OR2I1PQ8NGU4 316 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 ELMO2Q96JJ3 720 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 OR2M4Q96R27 311 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 PAFAH2Q99487 392 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 SLC13A1Q9BZW2 595 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 CAPN10Q9HC96 672 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 DNAJC16Q9Y2G8 782 aa16.93■□□□□ 0.3
LIME1-208ENST00000493265 TP53BP1Q12888 1972 aaPredicted RBP16.92■□□□□ 0.3
LIME1-208ENST00000493265 LNP1A1A4G5 178 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 KMOO15229 486 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 SGTAO43765 313 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 SDC3O75056 442 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 POP7O75817 140 aaKnown RBP16.92■□□□□ 0.3
LIME1-208ENST00000493265 AP2A2O94973 939 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 PKMP14618 531 aaKnown RBP16.92■□□□□ 0.3
LIME1-208ENST00000493265 CHRM3P20309 590 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 RPS3P23396 243 aaKnown RBP eCLIP16.92■□□□□ 0.3
LIME1-208ENST00000493265 SLCO1A2P46721 670 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 HK3P52790 923 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 CSE1LP55060 971 aaKnown RBP16.92■□□□□ 0.3
LIME1-208ENST00000493265 C1orf61Q13536 156 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 BMPR2Q13873 1038 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 HLA-BQ31612 363 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 PYCR3Q53H96 274 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 GRTP1Q5TC63 336 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 FBXO38Q6PIJ6 1188 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 ZC3HC1Q86WB0 502 aaKnown RBP16.92■□□□□ 0.3
LIME1-208ENST00000493265 ZNF547Q8IVP9 402 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 SPNS2Q8IVW8 549 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 LKAAEAR1Q8TD35 194 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 ZNF514Q96K75 400 aaPredicted RBP16.92■□□□□ 0.3
LIME1-208ENST00000493265 BIRC8Q96P09 236 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 RBBP8Q99708 897 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 TMEM168Q9H0V1 697 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 RMI1Q9H9A7 625 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 APOBEC3BQ9UH17 382 aaKnown RBP16.92■□□□□ 0.3
LIME1-208ENST00000493265 KCNK6Q9Y257 313 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 PLAAQ9Y263 795 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 MTO1Q9Y2Z2 717 aaKnown RBP16.92■□□□□ 0.3
LIME1-208ENST00000493265 PCDHB1Q9Y5F3 818 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 ADAMTS9Q9P2N4 1935 aa16.92■□□□□ 0.3
LIME1-208ENST00000493265 TLDC2A0PJX2 215 aa16.91■□□□□ 0.3
LIME1-208ENST00000493265 GPR89AB7ZAQ6 455 aa16.91■□□□□ 0.3
LIME1-208ENST00000493265 E5RI56 91 aa16.91■□□□□ 0.3
LIME1-208ENST00000493265 ARHGAP33O14559 1287 aa16.91■□□□□ 0.3
LIME1-208ENST00000493265 CHUKO15111 745 aa16.91■□□□□ 0.3
LIME1-208ENST00000493265 FTH1P02794 183 aa16.91■□□□□ 0.3
LIME1-208ENST00000493265 ESR1P03372 595 aa16.91■□□□□ 0.3
LIME1-208ENST00000493265 CSF2P04141 144 aa16.91■□□□□ 0.3
LIME1-208ENST00000493265 SYPP08247 313 aa16.91■□□□□ 0.3
LIME1-208ENST00000493265 GPR89BP0CG08 455 aa16.91■□□□□ 0.3
LIME1-208ENST00000493265 SPRP35270 261 aaPredicted RBP16.91■□□□□ 0.3
LIME1-208ENST00000493265 PRLHRP49683 370 aa16.91■□□□□ 0.3
LIME1-208ENST00000493265 BLKP51451 505 aa16.91■□□□□ 0.3
LIME1-208ENST00000493265 PGGT1BP53609 377 aa16.91■□□□□ 0.3
LIME1-208ENST00000493265 FOXC1Q12948 553 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms