RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 PTX3P26022 381 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 POU1F1P28069 291 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 APOBEC3AP31941 199 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 ECI1P42126 302 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 CARSP49589 748 aaKnown RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 GPR15P49685 360 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 ERFP50548 548 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 HK2P52789 917 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 ACTBP60709 375 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 ACTA2P62736 377 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 ACTG1P63261 375 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 ACTG2P63267 376 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 ACTC1P68032 377 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 ACTA1P68133 377 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 MRPS9P82933 396 aaKnown RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 CACNG1Q06432 222 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 SNTA1Q13424 505 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 VEZF1Q14119 521 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 LRRC14Q15048 493 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 PDK2Q15119 407 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 USF2Q15853 346 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 UGT8Q16880 541 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 SGSM1Q2NKQ1 1148 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 ZXDCQ2QGD7 858 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 TBRG1Q3YBR2 411 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 ZCWPW2Q504Y3 356 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 ZMAT1Q5H9K5 638 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 SPANXN2Q5MJ10 180 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 EOGTQ5NDL2 527 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 ZBTB37Q5TC79 503 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 MFSD14CQ5VZR4 134 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 WSCD1Q658N2 575 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 ARL6IP4Q66PJ3 421 aaKnown RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 ESRP1Q6NXG1 681 aaKnown RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 DUS1LQ6P1R4 473 aaKnown RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 TMEM88Q6PEY1 159 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 TSSK4Q6SA08 328 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 ADAMTSL4Q6UY14 1074 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 LYSMD3Q7Z3D4 306 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 ZFAND4Q86XD8 727 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 PROSER1Q86XN7 944 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 CCDC50Q8IVM0 306 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 C1orf210Q8IVY1 113 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 FOXRED2Q8IWF2 684 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 TIGD4Q8IY51 512 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 GHDCQ8N2G8 530 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 KREMEN2Q8NCW0 462 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 CCDC112Q8NEF3 446 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 OR13C3Q8NGS6 347 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 LRRC20Q8TCA0 184 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 PROX1Q92786 737 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 RAB1CQ92928 201 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 CD101Q93033 1021 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 SAT2Q96F10 170 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 OXNAD1Q96HP4 312 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 DNAJC1Q96KC8 554 aaKnown RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 LURAP1Q96LR2 239 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 ZNF48Q96MX3 618 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 PCYT2Q99447 389 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 TINAGL1Q9GZM7 467 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 EGLN1Q9GZT9 426 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 DNTTIP1Q9H147 329 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 CATSPERBQ9H7T0 1116 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 SMURF2Q9HAU4 748 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 FOLH1BQ9HBA9 442 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 GPN1Q9HCN4 374 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 ZNF302Q9NR11 478 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 PNO1Q9NRX1 252 aaKnown RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 PLCXD1Q9NUJ7 323 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 PRMT7Q9NVM4 692 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 RBAKQ9NYW8 714 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 WARS2Q9UGM6 360 aaKnown RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 POLLQ9UGP5 575 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 APOBEC3BQ9UH17 382 aaKnown RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 HAO1Q9UJM8 370 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 USP21Q9UK80 565 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 ADAM28Q9UKQ2 775 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 TRPC5Q9UL62 973 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 RPH3ALQ9UNE2 315 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 SHOC2Q9UQ13 582 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 AAR2Q9Y312 384 aaKnown RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 ADAM18Q9Y3Q7 739 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 MFHAS1Q9Y4C4 1052 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 SAMM50Q9Y512 469 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 INSL6Q9Y581 213 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 SNX14Q9Y5W7 946 aa4.17□□□□□ -1.74
BRCA1-220ENST00000492859 POLR3AO14802 1390 aaPredicted RBP4.17□□□□□ -1.74
BRCA1-220ENST00000492859 KRTAP4-8A0A0G2JLE6 195 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 A0A0U1RQJ8 604 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 ANKRD61A6NGH8 418 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 ASB14A6NK59 587 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 ANXA2P2A6NMY6 339 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 SRRM3A6NNA2 597 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 RBAK-RBAKDNI3L0D1 243 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 LAD1O00515 517 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 ITGB1BP1O14713 200 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 HGSO14964 777 aaPredicted RBP4.16□□□□□ -1.74
BRCA1-220ENST00000492859 CLIC2O15247 247 aa4.16□□□□□ -1.74
BRCA1-220ENST00000492859 ST8SIA3O43173 380 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms