RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 TNFAIP3P21580 790 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 VIPR1P32241 457 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 HTR7P34969 479 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 JAM2P57087 298 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 TPI1P60174 286 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 AP1S1P61966 158 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 DPTQ07507 201 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 MAP7Q14244 749 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 RFTN1Q14699 578 aaPredicted RBP12.99□□□□□ -0.33
HDAC3-213ENST00000492506 PTPRRQ15256 657 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 PYCR3Q53H96 274 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 HSP90AA4PQ58FG1 418 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 SNAP47Q5SQN1 464 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 PPP1R15BQ5SWA1 713 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 TRIM72Q6ZMU5 477 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 RFLNAQ6ZTI6 216 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 Q6ZVL8 140 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 KDELC2Q7Z4H8 507 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 TECPR1Q7Z6L1 1165 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 NPWQ8N729 165 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 TEX19Q8NA77 164 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 OR10G6Q8NH81 332 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 TLCD1Q96CP7 247 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 CCDC42Q96M95 316 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 OR2M4Q96R27 311 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 SLC38A3Q99624 504 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 NHEJ1Q9H9Q4 299 aaPredicted RBP12.99□□□□□ -0.33
HDAC3-213ENST00000492506 GPATCH2LQ9NWQ4 482 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 SIDT1Q9NXL6 827 aaKnown RBP12.99□□□□□ -0.33
HDAC3-213ENST00000492506 TMEM98Q9Y2Y6 226 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 PCDHGC4Q9Y5F7 938 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 PCYT1BQ9Y5K3 369 aaPredicted RBP12.99□□□□□ -0.33
HDAC3-213ENST00000492506 DOPEY1Q5JWR5 2465 aa12.99□□□□□ -0.33
HDAC3-213ENST00000492506 NPIPB15A6NHN6 443 aaPredicted RBP12.98□□□□□ -0.33
HDAC3-213ENST00000492506 CCDC188H7C350 402 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 PSMD11O00231 422 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 HNRNPCL1O60812 293 aaKnown RBP12.98□□□□□ -0.33
HDAC3-213ENST00000492506 SUN1O94901 812 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 PDGFAP04085 211 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 PYGBP11216 843 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 ZNF28P17035 718 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 GNLYP22749 145 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 HPDP32754 393 aaPredicted RBP12.98□□□□□ -0.33
HDAC3-213ENST00000492506 CTNNA1P35221 906 aaKnown RBP12.98□□□□□ -0.33
HDAC3-213ENST00000492506 PCK1P35558 622 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 PSMD7P51665 324 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 OGDHQ02218 1023 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 IL10RBQ08334 325 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 SLC10A7Q0GE19 358 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 CA9Q16790 459 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 CLEC16AQ2KHT3 1053 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 DENND2CQ68D51 928 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 RAET1GQ6H3X3 334 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 DOK6Q6PKX4 331 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 ASB18Q6ZVZ8 466 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 MON1BQ7L1V2 547 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 TSPAN33Q86UF1 283 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 TP53INP2Q8IXH6 220 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 AGGF1Q8N302 714 aaeCLIP12.98□□□□□ -0.33
HDAC3-213ENST00000492506 PAF1Q8N7H5 531 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 AHCYL2Q96HN2 611 aaKnown RBP12.98□□□□□ -0.33
HDAC3-213ENST00000492506 CHP1Q99653 195 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 CNPY3Q9BT09 278 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 SP110Q9HB58 689 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 PRDM8Q9NQV8 689 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 FAM114A2Q9NRY5 505 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 TXLNGQ9NUQ3 528 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 IL1RAPL1Q9NZN1 696 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 NFU1Q9UMS0 254 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 WDR37Q9Y2I8 494 aa12.98□□□□□ -0.33
HDAC3-213ENST00000492506 A0A0U1RQS6 177 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.97□□□□□ -0.33
HDAC3-213ENST00000492506 A0A1W2PQ67 120 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 MKRN2OSH3BPM6 223 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 EPHB6O15197 1021 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 SOCS5O75159 536 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 SEMA7AO75326 666 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 AGFG2O95081 481 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 MAP3K6O95382 1288 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 PEX11BO96011 259 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 TPP2P29144 1249 aaPredicted RBP12.97□□□□□ -0.33
HDAC3-213ENST00000492506 MAN1A1P33908 653 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 SOX5P35711 763 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 NSFP46459 744 aaKnown RBP12.97□□□□□ -0.33
HDAC3-213ENST00000492506 KLK7P49862 253 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 COPS2P61201 443 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 NCALDP61601 193 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 GUCY2DQ02846 1103 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 ZNF844Q08AG5 666 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 TRAF2Q12933 501 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 SNX1Q13596 522 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 QPCTQ16769 361 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 GSTA3Q16772 222 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 GALNTL6Q49A17 601 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 SPDYAQ5MJ70 313 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 WASHC2DQ5SRD0 308 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 ADAMTSL4Q6UY14 1074 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 TBC1D1Q86TI0 1168 aaPredicted RBP12.97□□□□□ -0.33
HDAC3-213ENST00000492506 TMEM135Q86UB9 458 aa12.97□□□□□ -0.33
HDAC3-213ENST00000492506 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms