RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	ANKRD22	Q5VYY1	191 aa		13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451	ABRAXAS1	Q6UWZ7	409 aa		13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451	SPRED1	Q7Z699	444 aa		13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451	CAND1	Q86VP6	1230 aa	Known RBP	13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451	HOOK3	Q86VS8	718 aa		13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451	PIANP	Q8IYJ0	282 aa		13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451	NAT8L	Q8N9F0	302 aa		13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451		Q8N9G6	341 aa	Predicted RBP	13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451	OR2L2	Q8NH16	312 aa		13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451	SLC37A2	Q8TED4	501 aa		13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451	LINC00615	Q96LM1	132 aa	Predicted RBP	13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451	ZNF778	Q96MU6	729 aa		13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451	GFM1	Q96RP9	751 aa	Known RBP	13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451	LRRN3	Q9H3W5	708 aa		13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451	SYNDIG1	Q9H7V2	258 aa		13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451	SARS2	Q9NP81	518 aa	Known RBP	13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451	PRDM8	Q9NQV8	689 aa		13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451	TREX1	Q9NSU2	369 aa		13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451	SYBU	Q9NX95	663 aa		13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451	RABGEF1	Q9UJ41	708 aa		13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451	SOX13	Q9UN79	622 aa		13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451	KNTC1	P50748	2209 aa		13.58	□□□□□ -0.24
PTPN7-215	ENST00000492451	DSP	P15924	2871 aa	Known RBP	13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	TRBV23OR9-2	A0A075B6M9	112 aa		13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	C17orf113	A0A1B0GUU1	675 aa		13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	TRABD2B	A6NFA1	517 aa		13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	OR51F1	A6NGY5	319 aa		13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	TMX2-CTNND1	H3BSU7	103 aa		13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	KIF2A	O00139	706 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	SMAP	O00193	183 aa		13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	NTN3	O00634	580 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	DNALI1	O14645	258 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	AVIL	O75366	819 aa		13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	RPLP0	P05388	317 aa	Known RBP	13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	XRCC1	P18887	633 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	PAM	P19021	973 aa		13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	NSG1	P42857	185 aa		13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	PRLHR	P49683	370 aa		13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	HHEX	Q03014	270 aa		13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	DBN1	Q16643	649 aa		13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	KCTD19	Q17RG1	926 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	METRNL	Q641Q3	311 aa		13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	CASC4	Q6P4E1	433 aa		13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	PACS1	Q6VY07	963 aa		13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	JAML	Q86YT9	394 aa		13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	TRIM48	Q8IWZ4	208 aa		13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	BEND7	Q8N7W2	519 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	C16orf45	Q96MC5	204 aa	Predicted RBP	13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	SERPINB12	Q96P63	405 aa		13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	CATSPERZ	Q9NTU4	200 aa		13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	CPNE7	Q9UBL6	633 aa		13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	ACSL5	Q9ULC5	683 aa		13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	ZFYVE26	Q68DK2	2539 aa		13.57	□□□□□ -0.24
PTPN7-215	ENST00000492451	GOLGA8M	H3BSY2	632 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	NDC80	O14777	642 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	PPM1D	O15297	605 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	CD3EAP	O15446	510 aa	Known RBP	13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	SGTA	O43765	313 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	CS	O75390	466 aa	Known RBP	13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	PRSS56	P0CW18	603 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	NMBR	P28336	390 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	ALDH4A1	P30038	563 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	PBLD	P30039	288 aa	Predicted RBP	13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	TTPA	P49638	278 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	GPLD1	P80108	840 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	ISX	Q2M1V0	245 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	IZUMO3	Q5VZ72	239 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	ZNF449	Q6P9G9	518 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	MAATS1	Q7Z4T9	603 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	RBM12B	Q8IXT5	1001 aa	Known RBP	13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	MPP5	Q8N3R9	675 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	SPATA4	Q8NEY3	305 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	HM13	Q8TCT9	377 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	KRT12	Q99456	494 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	SLC38A3	Q99624	504 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	DPYSL5	Q9BPU6	564 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	CCM2	Q9BSQ5	444 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	CCDC86	Q9H6F5	360 aa	Known RBP	13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	UCK1	Q9HA47	277 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	KCNK4	Q9NYG8	393 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	CELSR3	Q9NYQ7	3312 aa		13.56	□□□□□ -0.24
PTPN7-215	ENST00000492451	ITPR1	Q14643	2758 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	FAM237B	A0A1B0GVD1	139 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451		A0A1W2PQM1	296 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451		D6RAR5	112 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	PFDN6	O15212	129 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	TTI1	O43156	1089 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	B4GAT1	O43505	415 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	VAPB	O95292	243 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	CPNE6	O95741	557 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	VIP	P01282	170 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	FTH1	P02794	183 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	OR56A5	P0C7T3	313 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	RPL10	P27635	214 aa	Known RBP	13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	MAGEA3	P43357	314 aa		13.55	□□□□□ -0.24
PTPN7-215	ENST00000492451	EPHA4	P54764	986 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms