RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 OR2L2Q8NH16 312 aa15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 ZNF592Q92610 1267 aa15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 DEPDC7Q96QD5 511 aa15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 GFM1Q96RP9 751 aaKnown RBP15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 LRRN3Q9H3W5 708 aa15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 VPS37BQ9H9H4 285 aa15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 SARS2Q9NP81 518 aaKnown RBP15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 WASH6PQ9NQA3 447 aa15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 SCHIP1Q9P0W5 487 aaPredicted RBP15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 CDC23Q9UJX2 597 aa15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 ANAPC5Q9UJX4 755 aa15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 ARHGEF17Q96PE2 2063 aaPredicted RBP15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 SPTBN2O15020 2390 aa15.99■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 FAM237BA0A1B0GVD1 139 aa15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 A0A1W2PQM1 296 aa15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 MAGEB16A2A368 324 aa15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 FAM187AA6NFU0 413 aa15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 EFCAB8A8MWE9 144 aa15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 KIF2AO00139 706 aaPredicted RBP15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 SMAPO00193 183 aa15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 QSOX1O00391 747 aa15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 CASC3O15234 703 aaKnown RBP15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 ZW10O43264 779 aa15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 URI1O94763 535 aaPredicted RBP15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 VAPBO95292 243 aa15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 BRAFP15056 766 aa15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 ARNTP27540 789 aa15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 HALP42357 657 aa15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 GPR3P46089 330 aa15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 TARDBPQ13148 414 aaKnown RBP eCLIP15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 SEMA3AQ14563 771 aa15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 MORF4L2Q15014 288 aa15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 KIAA0930Q6ICG6 404 aaPredicted RBP15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 ABRAXAS1Q6UWZ7 409 aa15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 MAATS1Q7Z4T9 603 aa15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 HM13Q8TCT9 377 aa15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 ZNF669Q96BR6 464 aaPredicted RBP15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 SNF8Q96H20 258 aa15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 TRIM31Q9BZY9 425 aa15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 MARCH4Q9P2E8 410 aaPredicted RBP15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 CPNE7Q9UBL6 633 aa15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 FAM8A1Q9UBU6 413 aa15.98■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 COL27A1Q8IZC6 1860 aaPredicted RBP15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 GOLGA4Q13439 2230 aaKnown RBP15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 C17orf113A0A1B0GUU1 675 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 D6RAR5 112 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 CD3EAPO15446 510 aaKnown RBP15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 CSO75390 466 aaKnown RBP15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 SEC31AO94979 1220 aaKnown RBP15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 GSTM1P09488 218 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 ALDH4A1P30038 563 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 TTPAP49638 278 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 ITGA8P53708 1063 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 OR1D5P58170 312 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 UBE2IP63279 158 aaKnown RBP15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 GSTM4Q03013 218 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 CLCA4Q14CN2 919 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 ANKRD20A4Q4UJ75 823 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 DNAJC21Q5F1R6 531 aaKnown RBP15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 METRNLQ641Q3 311 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 HIBCHQ6NVY1 386 aaPredicted RBP15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 TRIM48Q8IWZ4 208 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 AGGF1Q8N302 714 aaeCLIP15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 CLDN19Q8N6F1 224 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 OTUD6BQ8N6M0 293 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 SH3KBP1Q96B97 665 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 SIGLEC10Q96LC7 697 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 SLC38A3Q99624 504 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 TRIM56Q9BRZ2 755 aaKnown RBP15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 CCM2Q9BSQ5 444 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 POT1Q9NUX5 634 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 ACSL5Q9ULC5 683 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 WDR37Q9Y2I8 494 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 MAD1L1Q9Y6D9 718 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 PRSS21Q9Y6M0 314 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 RPS6KL1Q9Y6S9 549 aa15.97■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 OR52A4PA6NMU1 304 aa15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 F8W8V4 182 aa15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 NDC80O14777 642 aa15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 RAD51CO43502 376 aa15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 B4GAT1O43505 415 aa15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 OR1I1O60431 355 aa15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 USP1O94782 785 aa15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 VIPP01282 170 aa15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 FTH1P02794 183 aa15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 OR56A5P0C7T3 313 aa15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 XRCC1P18887 633 aaPredicted RBP15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 SLC19A1P41440 591 aa15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 MRPS25P82663 173 aaKnown RBP15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 DHX9Q08211 1270 aaKnown RBP15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 WHAMMP3Q1A5X7 153 aa15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 MRNIPQ6NTE8 343 aa15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 XKR5Q6UX68 686 aa15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 LDB1Q86U70 411 aaPredicted RBP15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 TMEM135Q86UB9 458 aa15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 ZNF761Q86XN6 746 aaPredicted RBP15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 CFAP206Q8IYR0 622 aa15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 GATA6Q92908 595 aa15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 CXorf40BQ96DE9 158 aa15.96■□□□□ 0.15
MSH5-SAPCD1-206ENST00000491552 STAMBPL1Q96FJ0 436 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms