RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	GFM1	Q96RP9	751 aa	Known RBP	18.24	■□□□□ 0.51
C4A-256	ENST00000490663	C19orf43	Q9BQ61	176 aa		18.24	■□□□□ 0.51
C4A-256	ENST00000490663	RDH14	Q9HBH5	336 aa		18.24	■□□□□ 0.51
C4A-256	ENST00000490663	ZNF624	Q9P2J8	865 aa	Predicted RBP	18.24	■□□□□ 0.51
C4A-256	ENST00000490663	CFAP20	Q9Y6A4	193 aa	Known RBP	18.24	■□□□□ 0.51
C4A-256	ENST00000490663	APC2	O95996	2303 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	CCDC188	H7C350	402 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	NUDT21	O43809	227 aa	Known RBP	18.23	■□□□□ 0.51
C4A-256	ENST00000490663	POLB	P06746	335 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	RALB	P11234	206 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	ITGB6	P18564	788 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	IDS	P22304	550 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	ARNT	P27540	789 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	MAPK9	P45984	424 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	PRLHR	P49683	370 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	CLCNKA	P51800	687 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	SARNP	P82979	210 aa	Known RBP	18.23	■□□□□ 0.51
C4A-256	ENST00000490663	HHEX	Q03014	270 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	CAMK2B	Q13554	666 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	LAMB3	Q13751	1172 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	CLCA4	Q14CN2	919 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	FASTKD1	Q53R41	847 aa	Known RBP	18.23	■□□□□ 0.51
C4A-256	ENST00000490663	UNQ6494/PRO21346	Q6UXR6	183 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	RBM44	Q6ZP01	1051 aa	Known RBP	18.23	■□□□□ 0.51
C4A-256	ENST00000490663	USP53	Q70EK8	1073 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	DCBLD1	Q8N8Z6	715 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	MDM1	Q8TC05	714 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	ATXN7L3B	Q96GX2	97 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	FCRL3	Q96P31	734 aa	Predicted RBP	18.23	■□□□□ 0.51
C4A-256	ENST00000490663	NUDT22	Q9BRQ3	303 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	KIFC1	Q9BW19	673 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	TBC1D10A	Q9BXI6	508 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	WWP1	Q9H0M0	922 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	CATSPERZ	Q9NTU4	200 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	RIMKLB	Q9ULI2	386 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	USP24	Q9UPU5	2620 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	SDK2	Q58EX2	2172 aa		18.23	■□□□□ 0.51
C4A-256	ENST00000490663	FAM221B	A6H8Z2	402 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	TRABD2B	A6NFA1	517 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663		D6RAR5	112 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	CFAP99	D6REC4	459 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	NTN3	O00634	580 aa	Predicted RBP	18.22	■□□□□ 0.51
C4A-256	ENST00000490663	VAPB	O95292	243 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	CDK4	P11802	303 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	VCL	P18206	1134 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	CSF2RB	P32927	897 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	SLC19A1	P41440	591 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	BRD3	Q15059	726 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	MAP9	Q49MG5	647 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	BCL7A	Q4VC05	210 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	MSS51	Q4VC12	460 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	18.22	■□□□□ 0.51
C4A-256	ENST00000490663	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	18.22	■□□□□ 0.51
C4A-256	ENST00000490663	NLRP9	Q7RTR0	991 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	ZNF438	Q7Z4V0	828 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	MCU	Q8NE86	351 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	SPATA4	Q8NEY3	305 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	SPDYE1	Q8NFV5	336 aa	Predicted RBP	18.22	■□□□□ 0.51
C4A-256	ENST00000490663	OR6C4	Q8NGE1	309 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	LKAAEAR1	Q8TD35	194 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	18.22	■□□□□ 0.51
C4A-256	ENST00000490663	DEPDC7	Q96QD5	511 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	ZMYND15	Q9H091	742 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	XAB2	Q9HCS7	855 aa	Known RBP	18.22	■□□□□ 0.51
C4A-256	ENST00000490663	KCNK4	Q9NYG8	393 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	TMEM9	Q9P0T7	183 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	CPNE7	Q9UBL6	633 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	ENTPD2	Q9Y5L3	495 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663	MAD1L1	Q9Y6D9	718 aa		18.22	■□□□□ 0.51
C4A-256	ENST00000490663		A0A1W2PNU3	283 aa	Predicted RBP	18.21	■□□□□ 0.51
C4A-256	ENST00000490663	MGAT4D	A6NG13	374 aa		18.21	■□□□□ 0.51
C4A-256	ENST00000490663	CD3EAP	O15446	510 aa	Known RBP	18.21	■□□□□ 0.51
C4A-256	ENST00000490663	RAD51C	O43502	376 aa		18.21	■□□□□ 0.51
C4A-256	ENST00000490663	URI1	O94763	535 aa	Predicted RBP	18.21	■□□□□ 0.51
C4A-256	ENST00000490663	MPST	P25325	297 aa		18.21	■□□□□ 0.51
C4A-256	ENST00000490663	MAGEA3	P43357	314 aa		18.21	■□□□□ 0.51
C4A-256	ENST00000490663	FASLG	P48023	281 aa		18.21	■□□□□ 0.51
C4A-256	ENST00000490663	PREP	P48147	710 aa		18.21	■□□□□ 0.51
C4A-256	ENST00000490663	CSE1L	P55060	971 aa	Known RBP	18.21	■□□□□ 0.51
C4A-256	ENST00000490663	UBE2I	P63279	158 aa	Known RBP	18.21	■□□□□ 0.51
C4A-256	ENST00000490663	ISX	Q2M1V0	245 aa		18.21	■□□□□ 0.51
C4A-256	ENST00000490663	TRIM48	Q8IWZ4	208 aa		18.21	■□□□□ 0.51
C4A-256	ENST00000490663	CFAP206	Q8IYR0	622 aa		18.21	■□□□□ 0.51
C4A-256	ENST00000490663	OR2L2	Q8NH16	312 aa		18.21	■□□□□ 0.51
C4A-256	ENST00000490663	TRIM44	Q96DX7	344 aa	Predicted RBP	18.21	■□□□□ 0.51
C4A-256	ENST00000490663	SIGLEC10	Q96LC7	697 aa		18.21	■□□□□ 0.51
C4A-256	ENST00000490663	RMDN2	Q96LZ7	410 aa		18.21	■□□□□ 0.51
C4A-256	ENST00000490663	SLC38A3	Q99624	504 aa		18.21	■□□□□ 0.51
C4A-256	ENST00000490663	DPH5	Q9H2P9	285 aa		18.21	■□□□□ 0.51
C4A-256	ENST00000490663	MRM3	Q9HC36	420 aa	Known RBP	18.21	■□□□□ 0.51
C4A-256	ENST00000490663	EPB41L5	Q9HCM4	733 aa		18.21	■□□□□ 0.51
C4A-256	ENST00000490663	SAMD15	Q9P1V8	674 aa		18.21	■□□□□ 0.51
C4A-256	ENST00000490663	RNF14	Q9UBS8	474 aa		18.21	■□□□□ 0.51
C4A-256	ENST00000490663	ASPM	Q8IZT6	3477 aa		18.21	■□□□□ 0.51
C4A-256	ENST00000490663	SPTB	P11277	2137 aa		18.2	■□□□□ 0.5
C4A-256	ENST00000490663	IGHV1OR21-1	A0A087WYE8	117 aa		18.2	■□□□□ 0.5
C4A-256	ENST00000490663	AP3B1	O00203	1094 aa		18.2	■□□□□ 0.5
C4A-256	ENST00000490663	MLN	P12872	115 aa		18.2	■□□□□ 0.5
C4A-256	ENST00000490663	ITGA8	P53708	1063 aa		18.2	■□□□□ 0.5
C4A-256	ENST00000490663	DHX9	Q08211	1270 aa	Known RBP	18.2	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms