RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 UNC5BQ8IZJ1 945 aa10.15□□□□□ -0.78
SKA1-204ENST00000488454 FSTL5Q8N475 847 aaPredicted RBP10.15□□□□□ -0.78
SKA1-204ENST00000488454 MINDY1Q8N5J2 469 aa10.15□□□□□ -0.78
SKA1-204ENST00000488454 LMX1AQ8TE12 382 aa10.15□□□□□ -0.78
SKA1-204ENST00000488454 SGF29Q96ES7 293 aa10.15□□□□□ -0.78
SKA1-204ENST00000488454 SCARF2Q96GP6 870 aaPredicted RBP10.15□□□□□ -0.78
SKA1-204ENST00000488454 OR2M4Q96R27 311 aa10.15□□□□□ -0.78
SKA1-204ENST00000488454 BOCQ9BWV1 1114 aa10.15□□□□□ -0.78
SKA1-204ENST00000488454 GSDMCQ9BYG8 508 aa10.15□□□□□ -0.78
SKA1-204ENST00000488454 CDC42EP4Q9H3Q1 356 aaKnown RBP10.15□□□□□ -0.78
SKA1-204ENST00000488454 TRNAU1APQ9NX07 287 aaKnown RBP10.15□□□□□ -0.78
SKA1-204ENST00000488454 NINJ2Q9NZG7 142 aa10.15□□□□□ -0.78
SKA1-204ENST00000488454 GNPTGQ9UJJ9 305 aa10.15□□□□□ -0.78
SKA1-204ENST00000488454 PRKAB1Q9Y478 270 aa10.15□□□□□ -0.78
SKA1-204ENST00000488454 PCDHB1Q9Y5F3 818 aa10.15□□□□□ -0.78
SKA1-204ENST00000488454 DNMT3AQ9Y6K1 912 aaPredicted RBP10.15□□□□□ -0.78
SKA1-204ENST00000488454 CEP192Q8TEP8 1941 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 IGLV3-16A0A075B6K0 115 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 TCRBV9S1A1TA0A576 114 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 LNP1A1A4G5 178 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 KLHL33A6NCF5 533 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 OR2AG2A6NM03 316 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 H3BMM5 538 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 CHUKO15111 745 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 SCAMP1O15126 338 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 OR1I1O60431 355 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 DNAJC6O75061 913 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 POP7O75817 140 aaKnown RBP10.14□□□□□ -0.79
SKA1-204ENST00000488454 ACSL3O95573 720 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 FTH1P02794 183 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 GSTM1P09488 218 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 SNRPBP14678 240 aaKnown RBP10.14□□□□□ -0.79
SKA1-204ENST00000488454 FMO4P31512 558 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 SLC1A2P43004 574 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 EIF3BP55884 814 aaKnown RBP10.14□□□□□ -0.79
SKA1-204ENST00000488454 GPX6P59796 221 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 B4GALNT1Q00973 533 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 GSTM4Q03013 218 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 ILF2Q12905 390 aaKnown RBP10.14□□□□□ -0.79
SKA1-204ENST00000488454 C1orf61Q13536 156 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 LRP8Q14114 963 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 SEMA3AQ14563 771 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 TYSND1Q2T9J0 566 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 BCL7AQ4VC05 210 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 MRPL14Q6P1L8 145 aaKnown RBP10.14□□□□□ -0.79
SKA1-204ENST00000488454 MICALCLQ6ZW33 695 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 TAF8Q7Z7C8 310 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 AMZ2Q86W34 360 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 SLC26A11Q86WA9 606 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 GKN2Q86XP6 184 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 DENND6AQ8IWF6 608 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 SDR16C5Q8N3Y7 309 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 CLDN19Q8N6F1 224 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 C2CD4AQ8NCU7 369 aaPredicted RBP10.14□□□□□ -0.79
SKA1-204ENST00000488454 FBF1Q8TES7 1133 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 PDXPQ96GD0 296 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 CYTH2Q99418 400 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 CCDC77Q9BR77 488 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 CCM2Q9BSQ5 444 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 EDEM2Q9BV94 578 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 TMEM168Q9H0V1 697 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 IL21RQ9HBE5 538 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 PLAC1Q9HBJ0 212 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 PARD6AQ9NPB6 346 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 TMEM9BQ9NQ34 198 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 FBXO6Q9NRD1 293 aaPredicted RBP10.14□□□□□ -0.79
SKA1-204ENST00000488454 TM7SF3Q9NS93 570 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 KLF15Q9UIH9 416 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 CRYL1Q9Y2S2 319 aa10.14□□□□□ -0.79
SKA1-204ENST00000488454 SPAG17Q6Q759 2223 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 FANCMQ8IYD8 2048 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 A0A087WUV0 522 aaPredicted RBP10.13□□□□□ -0.79
SKA1-204ENST00000488454 E5RI56 91 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 AQP9O43315 295 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 SDC3O75056 442 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 ERLIN1O75477 346 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 PIAS2O75928 621 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 HAUS5O94927 633 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 TRIM16O95361 564 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 AHSGP02765 367 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 ESR1P03372 595 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 FUCA1P04066 466 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 ANXA6P08133 673 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 ZNF883P0CG24 379 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 MYBL2P10244 700 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 ALPPL2P10696 532 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 ACP5P13686 325 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 CHRM3P20309 590 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 RPS3P23396 243 aaKnown RBP eCLIP10.13□□□□□ -0.79
SKA1-204ENST00000488454 DGKAP23743 735 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 PBLDP30039 288 aaPredicted RBP10.13□□□□□ -0.79
SKA1-204ENST00000488454 LEPRP48357 1165 aaKnown RBP10.13□□□□□ -0.79
SKA1-204ENST00000488454 CD151P48509 253 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 CTSCP53634 463 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 ADARP55265 1226 aaKnown RBP10.13□□□□□ -0.79
SKA1-204ENST00000488454 MPP1Q00013 466 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 IL9RQ01113 521 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 BNIP3Q12983 259 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 SLC14A1Q13336 389 aa10.13□□□□□ -0.79
SKA1-204ENST00000488454 NAA30Q147X3 362 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms