RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 PCYT2Q99447 389 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 MTERF1Q99551 399 aaKnown RBP4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 HGH1Q9BTY7 390 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 MMP27Q9H306 513 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 TAS2R14Q9NYV8 317 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 CRNNQ9UBG3 495 aaPredicted RBP4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 B3GALT5Q9Y2C3 310 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 KLHL20Q9Y2M5 609 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 MROH1Q8NDA8 1641 aa4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 EIF2AK4Q9P2K8 1649 aaKnown RBP4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 DHX29Q7Z478 1369 aaKnown RBP4.89□□□□□ -1.63
PRPF38A-203ENST00000487160 ERVK-7P63135 1459 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 NCOA2Q15596 1464 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 MBD5Q9P267 1494 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 CHD2O14647 1828 aaKnown RBP4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 IGLV5-52A0A0A0MRZ9 124 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 GOLGA6L9A6NEM1 432 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 URADA6NGE7 173 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 CD8B2A6NJW9 211 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 J3QR06 171 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 KCNJ13O60928 360 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 GGPS1O95749 300 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 AFPP02771 609 aaKnown RBP4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 HOXC6P09630 235 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 IGHV4-30-4P0DP06 118 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 CPT2P23786 658 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 EEF1DP29692 281 aaKnown RBP4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 CDC25AP30304 524 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 MATR3P43243 847 aaKnown RBP eCLIP4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 KCNJ4P48050 445 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 ARSEP51690 589 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 CLDN20P56880 219 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 CRYZQ08257 329 aaKnown RBP4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 ALCAMQ13740 583 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 SNTB1Q13884 538 aaKnown RBP4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 IL11RAQ14626 422 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 PLCB4Q15147 1175 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 SYT16Q17RD7 645 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 ATP13A5Q4VNC0 1218 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 ZNF628Q5EBL2 1059 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 XKR9Q5GH70 373 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 DHRS7BQ6IAN0 325 aaPredicted RBP4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 C8orf82Q6P1X6 216 aaPredicted RBP4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 ZNF549Q6P9A3 640 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 ATG9AQ7Z3C6 839 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 HAUS6Q7Z4H7 955 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 KRT77Q7Z794 578 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 ADIPOR2Q86V24 386 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 SLC38A9Q8NBW4 561 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 OR5R1Q8NH85 324 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 UTP15Q8TED0 518 aaKnown RBP4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 KRTAP4-9Q9BYQ8 210 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 ANKRD2Q9GZV1 360 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 GOLPH3LQ9H4A5 285 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 CHMP1AQ9HD42 196 aaPredicted RBP4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 RNF7Q9UBF6 113 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 WBP11Q9Y2W2 641 aaKnown RBP4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 RTEL1-TNFRSF6BF6WH68 1400 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 ARHGAP23Q9P227 1491 aa4.88□□□□□ -1.63
PRPF38A-203ENST00000487160 TCRBV21S2A2A0A5A6 115 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 A8MXE2 369 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 TMEM189-UBE2V1I3L0A0 370 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 GAGE7O76087 117 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 CLDN14O95500 239 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 GLUD1P00367 558 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 GAGE12FP0CL80 117 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 GAGE12GP0CL81 117 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 GAGE12IP0CL82 117 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 MYBL1P10243 752 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 GJA1P17302 382 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 GLUD2P49448 558 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 RAD23AP54725 363 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 PDE1BQ01064 536 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 GAGE1Q13065 139 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 GAGE4Q13068 117 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 UBE2V1Q13404 147 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 MVPQ14764 893 aaKnown RBP4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 OASLQ15646 514 aaKnown RBP4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 SNAPC1Q16533 368 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 LETM2Q2VYF4 491 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 CRY2Q49AN0 593 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 KRTCAP3Q53RY4 240 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 TCP11X2Q5H9J9 407 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 TEX38Q6PEX7 206 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 GPR180Q86V85 440 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 CEP57Q86XR8 500 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 CLIP4Q8N3C7 705 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 FBXO39Q8N4B4 442 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 TC2NQ8N9U0 490 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 RBM15BQ8NDT2 890 aaKnown RBP4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 Q8NFD4 153 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 OR6J1Q8NGC5 347 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 TBC1D16Q8TBP0 767 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 SECISBP2LQ93073 1101 aaKnown RBP4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 VPS33AQ96AX1 596 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 RMDN1Q96DB5 314 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 MTBPQ96DY7 904 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 C3orf30Q96M34 536 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 KRTAP4-7Q9BYR0 210 aa4.87□□□□□ -1.63
PRPF38A-203ENST00000487160 PCDH9Q9HC56 1237 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms