RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 CCL23P55773 120 aa16.27■□□□□ 0.19
COL7A1-210ENST00000487017 MAB21L3Q8N8X9 362 aa16.27■□□□□ 0.19
COL7A1-210ENST00000487017 RAD51AP1Q96B01 352 aa16.27■□□□□ 0.19
COL7A1-210ENST00000487017 INTS10Q9NVR2 710 aaKnown RBP16.27■□□□□ 0.19
COL7A1-210ENST00000487017 CNTN3Q9P232 1028 aa16.27■□□□□ 0.19
COL7A1-210ENST00000487017 TCHHQ07283 1943 aa16.27■□□□□ 0.19
COL7A1-210ENST00000487017 ADAMDEC1O15204 470 aa16.27■□□□□ 0.19
COL7A1-210ENST00000487017 OR5F1O95221 314 aa16.27■□□□□ 0.19
COL7A1-210ENST00000487017 IFNGP01579 166 aa16.27■□□□□ 0.19
COL7A1-210ENST00000487017 PIGRP01833 764 aa16.27■□□□□ 0.19
COL7A1-210ENST00000487017 C9P02748 559 aa16.27■□□□□ 0.19
COL7A1-210ENST00000487017 SLC7A1P30825 629 aa16.27■□□□□ 0.19
COL7A1-210ENST00000487017 C2orf80Q0P641 193 aa16.27■□□□□ 0.19
COL7A1-210ENST00000487017 TMEM214Q6NUQ4 689 aaKnown RBP16.27■□□□□ 0.19
COL7A1-210ENST00000487017 TRPS1Q9UHF7 1281 aa16.27■□□□□ 0.19
COL7A1-210ENST00000487017 MPZL2O60487 215 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 LGR5O75473 907 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 ZZZ3Q8IYH5 903 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 TPK1Q9H3S4 243 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 TMEM165Q9HC07 324 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 ZNF221Q9UK13 617 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 SOWAHBA6NEL2 793 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 NEDD8-MDP1E9PL57 170 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 CHST10O43529 356 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 KRT33AO76009 404 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 ESR1P03372 595 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 IFNW1P05000 195 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 SDC2P34741 201 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 C5orf22Q49AR2 442 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 PLET1Q6UQ28 207 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 RAB43Q86YS6 212 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 PSMG2Q969U7 264 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 RNF208Q9H0X6 261 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 PADI3Q9ULW8 664 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 MYBPHLA2RUH7 354 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 FAM159BA6NKW6 160 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 CLDN25C9JDP6 229 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 RAP2AP10114 183 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 TCF4P15884 667 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 NR4A1P22736 598 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 OMPP47874 163 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 RBBP4Q09028 425 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 KCNJ11Q14654 390 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 LINGO4Q6UY18 593 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 RPTNQ6XPR3 784 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 TTC29Q8NA56 475 aaPredicted RBP16.26■□□□□ 0.19
COL7A1-210ENST00000487017 OR7D4Q8NG98 312 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 SLC17A6Q9P2U8 582 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 PCDHGC4Q9Y5F7 938 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 YJEFN3A6XGL0 299 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 AIREO43918 545 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 UGT2B4P06133 528 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 DLG1Q12959 904 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 NAE1Q13564 534 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 SNAPC1Q16533 368 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 PIK3R6Q5UE93 754 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 TMPRSS11AQ6ZMR5 421 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 SERPINA9Q86WD7 417 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 FAM98AQ8NCA5 519 aaKnown RBP16.26■□□□□ 0.19
COL7A1-210ENST00000487017 ATG10Q9H0Y0 220 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 SLC27A6Q9Y2P4 619 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 MAP4K5Q9Y4K4 846 aa16.26■□□□□ 0.19
COL7A1-210ENST00000487017 CXorf49A8MYA2 514 aaPredicted RBP16.25■□□□□ 0.19
COL7A1-210ENST00000487017 PTGER3P43115 390 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 ECT2LQ008S8 904 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 TAF1AQ15573 450 aaPredicted RBP16.25■□□□□ 0.19
COL7A1-210ENST00000487017 RNF19BQ6ZMZ0 732 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 CPNE9Q8IYJ1 553 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 GPR65Q8IYL9 337 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 GLB1L3Q8NCI6 653 aaPredicted RBP16.25■□□□□ 0.19
COL7A1-210ENST00000487017 SLC13A3Q8WWT9 602 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 EZH1Q92800 747 aaPredicted RBP16.25■□□□□ 0.19
COL7A1-210ENST00000487017 FCRL5Q96RD9 977 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 NMUR1Q9HB89 426 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 PLK2Q9NYY3 685 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 HMGXB4Q9UGU5 601 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 PIK3C2AO00443 1686 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 A0A1B0GVM2 712 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 A0A1W2PQ67 120 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 TCAF2A6NFQ2 919 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 KLF11O14901 512 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 NDUFS2O75306 463 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 AP2A2O94973 939 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 CCNDBP1O95273 360 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 FESP07332 822 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 PRKAR2AP13861 404 aaKnown RBP16.25■□□□□ 0.19
COL7A1-210ENST00000487017 C9orf64Q5T6V5 341 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 FAM171BQ6P995 826 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 SLC24A5Q71RS6 500 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 GALNT15Q8N3T1 639 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 RAB2BQ8WUD1 216 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 AP2M1Q96CW1 435 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 OXCT2Q9BYC2 517 aaPredicted RBP16.25■□□□□ 0.19
COL7A1-210ENST00000487017 ZNF358Q9NW07 568 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 FKBPLQ9UIM3 349 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 KLRG2A4D1S0 409 aaPredicted RBP16.25■□□□□ 0.19
COL7A1-210ENST00000487017 FAM86C2PA6NEL3 165 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 PER2O15055 1255 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 DHFRP00374 187 aa16.25■□□□□ 0.19
COL7A1-210ENST00000487017 ZNF12P17014 697 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms