RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 TMEM98Q9Y2Y6 226 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 ARL5AQ9Y689 179 aa5.65□□□□□ -1.5
CUX1-208ENST00000485792 TMEM8BA6NDV4 472 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 OR51F1A6NGY5 319 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 INPP4BO15327 924 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 TLX3O43711 291 aaPredicted RBP5.64□□□□□ -1.51
CUX1-208ENST00000485792 VEGFDO43915 354 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 KCNJ13O60928 360 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 SLC4A1P02730 911 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 PDGFAP04085 211 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 PROS1P07225 676 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 ALPPL2P10696 532 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 BMP4P12644 408 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 BRAFP15056 766 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 GLB1P16278 677 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 ZNF8P17098 575 aaPredicted RBP5.64□□□□□ -1.51
CUX1-208ENST00000485792 LPOP22079 712 aaPredicted RBP5.64□□□□□ -1.51
CUX1-208ENST00000485792 RPL22P35268 128 aaKnown RBP5.64□□□□□ -1.51
CUX1-208ENST00000485792 FDFT1P37268 417 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 GPR3P46089 330 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 KCNJ1P48048 391 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 CTSCP53634 463 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 PDE1BQ01064 536 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 ZFP36L1Q07352 338 aaKnown RBP5.64□□□□□ -1.51
CUX1-208ENST00000485792 CLPPQ16740 277 aaPredicted RBP5.64□□□□□ -1.51
CUX1-208ENST00000485792 ANKRD22Q5VYY1 191 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 PAPD7Q5XG87 772 aaKnown RBP5.64□□□□□ -1.51
CUX1-208ENST00000485792 ALS2CLQ60I27 953 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 RAET1GQ6H3X3 334 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 ABRAXAS1Q6UWZ7 409 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 C4orf22Q6V702 233 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 FAM83HQ6ZRV2 1179 aaPredicted RBP5.64□□□□□ -1.51
CUX1-208ENST00000485792 GKN2Q86XP6 184 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 PIANPQ8IYJ0 282 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 SLC35F6Q8N357 371 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 SFRP1Q8N474 314 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 IPMKQ8NFU5 416 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 OR13C4Q8NGS5 318 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 OR13J1Q8NGT2 312 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 WDR48Q8TAF3 677 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 LKAAEAR1Q8TD35 194 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 SLCO2A1Q92959 643 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 NAT6Q93015 286 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 PBKQ96KB5 322 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 LINC00615Q96LM1 132 aaPredicted RBP5.64□□□□□ -1.51
CUX1-208ENST00000485792 ALS2CR12Q96Q35 445 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 RANBP9Q96S59 729 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 FICDQ9BVA6 458 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 LRRC40Q9H9A6 602 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 UCK1Q9HA47 277 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 BPIFA1Q9NP55 256 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 CASS4Q9NQ75 786 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 EIF2B3Q9NR50 452 aaKnown RBP5.64□□□□□ -1.51
CUX1-208ENST00000485792 HOMER3Q9NSC5 361 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 NLE1Q9NVX2 485 aaPredicted RBP5.64□□□□□ -1.51
CUX1-208ENST00000485792 TMEM9Q9P0T7 183 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 TAAR2Q9P1P5 351 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 ATXN10Q9UBB4 475 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 SLC2A6Q9UGQ3 507 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 PADI4Q9UM07 663 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 GPR34Q9UPC5 381 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 KCNMB2Q9Y691 235 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 CFAP46Q8IYW2 2715 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 TNRC6AQ8NDV7 1962 aaKnown RBP5.64□□□□□ -1.51
CUX1-208ENST00000485792 SCN2AQ99250 2005 aa5.64□□□□□ -1.51
CUX1-208ENST00000485792 PIEZO2Q9H5I5 2752 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 ATRXP46100 2492 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 TLN1Q9Y490 2541 aaKnown RBP5.63□□□□□ -1.51
CUX1-208ENST00000485792 CCDC78A2IDD5 438 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 KLHL33A6NCF5 533 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 KRT87PA6NCN2 255 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 PPM1DO15297 605 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 PSMD3O43242 534 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 ZSCAN12O43309 604 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 GRID2O43424 1007 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 B4GAT1O43505 415 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 STK10O94804 968 aaKnown RBP5.63□□□□□ -1.51
CUX1-208ENST00000485792 FGGP02679 453 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 ANXA6P08133 673 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 XRCC1P18887 633 aaPredicted RBP5.63□□□□□ -1.51
CUX1-208ENST00000485792 IVDP26440 423 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 CCKBRP32239 447 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 SPAM1P38567 509 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 MAGEA3P43357 314 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 MAP2K3P46734 347 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 PPP1CAP62136 330 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 UBE2IP63279 158 aaKnown RBP5.63□□□□□ -1.51
CUX1-208ENST00000485792 CDK16Q00536 496 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 TMEM115Q12893 351 aaPredicted RBP5.63□□□□□ -1.51
CUX1-208ENST00000485792 SRSF6Q13247 344 aaKnown RBP5.63□□□□□ -1.51
CUX1-208ENST00000485792 NFATC2Q13469 925 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 NR0B2Q15466 257 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 CHRNA6Q15825 494 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 ISXQ2M1V0 245 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 PLA2G4EQ3MJ16 856 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 GPR33Q49SQ1 333 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 C14orf28Q4W4Y0 310 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 SEL1L2Q5TEA6 688 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 HES3Q5TGS1 186 aa5.63□□□□□ -1.51
CUX1-208ENST00000485792 AGAP9Q5VTM2 703 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms