RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 SPAM1P38567 509 aa17.66■□□□□ 0.42
ATG4B-221ENST00000483778 CCR10P46092 362 aa17.66■□□□□ 0.42
ATG4B-221ENST00000483778 CSRP3P50461 194 aa17.66■□□□□ 0.42
ATG4B-221ENST00000483778 KCNAB1Q14722 419 aa17.66■□□□□ 0.42
ATG4B-221ENST00000483778 RPE65Q16518 533 aa17.66■□□□□ 0.42
ATG4B-221ENST00000483778 SKOR2Q2VWA4 1001 aaPredicted RBP17.66■□□□□ 0.42
ATG4B-221ENST00000483778 GPRC6AQ5T6X5 926 aa17.66■□□□□ 0.42
ATG4B-221ENST00000483778 C16orf46Q6P387 395 aa17.66■□□□□ 0.42
ATG4B-221ENST00000483778 BZW1Q7L1Q6 419 aaKnown RBP17.66■□□□□ 0.42
ATG4B-221ENST00000483778 CNGA4Q8IV77 575 aa17.66■□□□□ 0.42
ATG4B-221ENST00000483778 AVL9Q8NBF6 648 aa17.66■□□□□ 0.42
ATG4B-221ENST00000483778 SRPK1Q96SB4 655 aaKnown RBP17.66■□□□□ 0.42
ATG4B-221ENST00000483778 FAM118BQ9BPY3 351 aa17.66■□□□□ 0.42
ATG4B-221ENST00000483778 APOL2Q9BQE5 337 aa17.66■□□□□ 0.42
ATG4B-221ENST00000483778 ULBP3Q9BZM4 244 aa17.66■□□□□ 0.42
ATG4B-221ENST00000483778 ADNPQ9H2P0 1102 aa17.66■□□□□ 0.42
ATG4B-221ENST00000483778 TRABDQ9H4I3 376 aa17.66■□□□□ 0.42
ATG4B-221ENST00000483778 ZNF768Q9H5H4 540 aaKnown RBP17.66■□□□□ 0.42
ATG4B-221ENST00000483778 AKIRIN1Q9H9L7 192 aaPredicted RBP17.66■□□□□ 0.42
ATG4B-221ENST00000483778 ZNF71Q9NQZ8 489 aaPredicted RBP17.66■□□□□ 0.42
ATG4B-221ENST00000483778 POT1Q9NUX5 634 aa17.66■□□□□ 0.42
ATG4B-221ENST00000483778 ARL5AQ9Y689 179 aa17.66■□□□□ 0.42
ATG4B-221ENST00000483778 CFAP20Q9Y6A4 193 aaKnown RBP17.66■□□□□ 0.42
ATG4B-221ENST00000483778 DUSP10Q9Y6W6 482 aa17.66■□□□□ 0.42
ATG4B-221ENST00000483778 CCDC88CQ9P219 2028 aa17.65■□□□□ 0.42
ATG4B-221ENST00000483778 SEC16AO15027 2179 aa17.65■□□□□ 0.42
ATG4B-221ENST00000483778 K7EM74 188 aa17.65■□□□□ 0.42
ATG4B-221ENST00000483778 KIAA0754O94854 1291 aa17.65■□□□□ 0.42
ATG4B-221ENST00000483778 PBLDP30039 288 aaPredicted RBP17.65■□□□□ 0.42
ATG4B-221ENST00000483778 CAPZBP47756 277 aa17.65■□□□□ 0.42
ATG4B-221ENST00000483778 PPP2R5EQ16537 467 aa17.65■□□□□ 0.42
ATG4B-221ENST00000483778 IRGCQ6NXR0 463 aa17.65■□□□□ 0.42
ATG4B-221ENST00000483778 AADACL2Q6P093 401 aa17.65■□□□□ 0.42
ATG4B-221ENST00000483778 BBS12Q6ZW61 710 aa17.65■□□□□ 0.42
ATG4B-221ENST00000483778 DET1Q7L5Y6 550 aa17.65■□□□□ 0.42
ATG4B-221ENST00000483778 GLT6D1Q7Z4J2 308 aa17.65■□□□□ 0.42
ATG4B-221ENST00000483778 TMEM135Q86UB9 458 aa17.65■□□□□ 0.42
ATG4B-221ENST00000483778 AMZ2Q86W34 360 aa17.65■□□□□ 0.42
ATG4B-221ENST00000483778 CCDC50Q8IVM0 306 aa17.65■□□□□ 0.42
ATG4B-221ENST00000483778 BRSK1Q8TDC3 778 aa17.65■□□□□ 0.42
ATG4B-221ENST00000483778 STARD8Q92502 1023 aa17.65■□□□□ 0.42
ATG4B-221ENST00000483778 KIAA1143Q96AT1 154 aaPredicted RBP17.65■□□□□ 0.42
ATG4B-221ENST00000483778 FICDQ9BVA6 458 aa17.65■□□□□ 0.42
ATG4B-221ENST00000483778 RSPH14Q9UHP6 348 aa17.65■□□□□ 0.42
ATG4B-221ENST00000483778 PTPN13Q12923 2485 aa17.65■□□□□ 0.42
ATG4B-221ENST00000483778 GLYATL1P3A0A0U1RQE8 302 aa17.64■□□□□ 0.41
ATG4B-221ENST00000483778 H7C0C1 242 aa17.64■□□□□ 0.41
ATG4B-221ENST00000483778 MTSS1O43312 755 aa17.64■□□□□ 0.41
ATG4B-221ENST00000483778 SGTAO43765 313 aa17.64■□□□□ 0.41
ATG4B-221ENST00000483778 SPAG6O75602 509 aa17.64■□□□□ 0.41
ATG4B-221ENST00000483778 FOLR1P15328 257 aa17.64■□□□□ 0.41
ATG4B-221ENST00000483778 PTMSP20962 102 aa17.64■□□□□ 0.41
ATG4B-221ENST00000483778 FECHP22830 423 aa17.64■□□□□ 0.41
ATG4B-221ENST00000483778 DLSTP36957 453 aa17.64■□□□□ 0.41
ATG4B-221ENST00000483778 ATP5OP48047 213 aa17.64■□□□□ 0.41
ATG4B-221ENST00000483778 TLE1Q04724 770 aa17.64■□□□□ 0.41
ATG4B-221ENST00000483778 DMPKQ09013 629 aa17.64■□□□□ 0.41
ATG4B-221ENST00000483778 MPP3Q13368 585 aa17.64■□□□□ 0.41
ATG4B-221ENST00000483778 MSLNQ13421 630 aaPredicted RBP17.64■□□□□ 0.41
ATG4B-221ENST00000483778 GTF2H3Q13889 308 aa17.64■□□□□ 0.41
ATG4B-221ENST00000483778 FNBP1LQ5T0N5 605 aa17.64■□□□□ 0.41
ATG4B-221ENST00000483778 DUS1LQ6P1R4 473 aaKnown RBP17.64■□□□□ 0.41
ATG4B-221ENST00000483778 C6orf15Q6UXA7 325 aaPredicted RBP17.64■□□□□ 0.41
ATG4B-221ENST00000483778 PRSS42Q7Z5A4 293 aa17.64■□□□□ 0.41
ATG4B-221ENST00000483778 LILRA3Q8N6C8 439 aaPredicted RBP17.64■□□□□ 0.41
ATG4B-221ENST00000483778 DDHD1Q8NEL9 900 aa17.64■□□□□ 0.41
ATG4B-221ENST00000483778 SPDYE1Q8NFV5 336 aaPredicted RBP17.64■□□□□ 0.41
ATG4B-221ENST00000483778 ZNF398Q8TD17 642 aa17.64■□□□□ 0.41
ATG4B-221ENST00000483778 DTX3LQ8TDB6 740 aa17.64■□□□□ 0.41
ATG4B-221ENST00000483778 TTC25Q96NG3 672 aa17.64■□□□□ 0.41
ATG4B-221ENST00000483778 INSM2Q96T92 566 aaPredicted RBP17.64■□□□□ 0.41
ATG4B-221ENST00000483778 TRIT1Q9H3H1 467 aaKnown RBP17.64■□□□□ 0.41
ATG4B-221ENST00000483778 EPHA6Q9UF33 1036 aa17.64■□□□□ 0.41
ATG4B-221ENST00000483778 CROTQ9UKG9 612 aa17.64■□□□□ 0.41
ATG4B-221ENST00000483778 TOX3O15405 576 aaPredicted RBP17.63■□□□□ 0.41
ATG4B-221ENST00000483778 NDUFA10O95299 355 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 FGF5P12034 268 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 NELFEP18615 380 aaKnown RBP17.63■□□□□ 0.41
ATG4B-221ENST00000483778 HLA-DPA1P20036 260 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 TCN2P20062 427 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 ADRA1AP35348 466 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 MAP7Q14244 749 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 LDLRAP1Q5SW96 308 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 METRNLQ641Q3 311 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 RANBP10Q6VN20 620 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 RASGRP3Q8IV61 690 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 ESX1Q8N693 406 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 OR4K2Q8NGD2 314 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 ABHD17AQ96GS6 310 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 PPM1MQ96MI6 270 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 CATSPER2Q96P56 530 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 RUFY1Q96T51 708 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 VAT1Q99536 393 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 NRTNQ99748 197 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 MAP3K3Q99759 626 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 RAB33BQ9H082 229 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 WWP1Q9H0M0 922 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 HACD3Q9P035 362 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 SEMA5BQ9P283 1151 aa17.63■□□□□ 0.41
ATG4B-221ENST00000483778 FAM8A1Q9UBU6 413 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms