RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 PREBQ9HCU5 417 aa9.04□□□□□ -0.96
CALD1-220ENST00000482470 INTS10Q9NVR2 710 aaKnown RBP9.04□□□□□ -0.96
CALD1-220ENST00000482470 RAB26Q9ULW5 256 aa9.04□□□□□ -0.96
CALD1-220ENST00000482470 CEP350Q5VT06 3117 aa9.04□□□□□ -0.96
CALD1-220ENST00000482470 LCHNA4D1U4 455 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 CCL16O15467 120 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 HNRNPRO43390 633 aaKnown RBP9.03□□□□□ -0.96
CALD1-220ENST00000482470 STC2O76061 302 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 G6PDP11413 515 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 MSH3P20585 1137 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 PTGER3P43115 390 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 RPIAP49247 311 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 GSK3BP49841 420 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 CCT8P50990 548 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 IL5RAQ01344 420 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 TLE2Q04725 743 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 TCEA2Q15560 299 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 CHRNA6Q15825 494 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 ZNF284Q2VY69 593 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 GPR107Q5VW38 600 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 USP45Q70EL2 814 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 C11orf96Q7Z7L8 435 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 MCOLN3Q8TDD5 553 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 OSCP1Q8WVF1 389 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 PCDH12Q9NPG4 1184 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 ABCB8Q9NUT2 735 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 SMIM31A0A1B0GVY4 71 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 ESR1P03372 595 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 SLC7A1P30825 629 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 SOAT1P35610 550 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 SMARCB1Q12824 385 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 SPIDRQ14159 915 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 KRT33BQ14525 404 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 NADSYN1Q6IA69 706 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 TMEM207Q6UWW9 146 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 RSPO2Q6UXX9 243 aaPredicted RBP9.03□□□□□ -0.96
CALD1-220ENST00000482470 MBOAT1Q6ZNC8 495 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 UBE2R2Q712K3 238 aaPredicted RBP9.03□□□□□ -0.96
CALD1-220ENST00000482470 BHLHA9Q7RTU4 235 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 SYVN1Q86TM6 617 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 HORMAD1Q86X24 394 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 OR2T12Q8NG77 320 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 OR4F6Q8NGB9 312 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 GATA6Q92908 595 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 SLC39A13Q96H72 371 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 HPS4Q9NQG7 708 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 ADGRE2Q9UHX3 823 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 VPS51Q9UID3 782 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 CNTRLQ7Z7A1 2325 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 BBIP1A8MTZ0 92 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 H3BSA7 217 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 ARPC2O15144 300 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 KDELR3O43731 214 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 STK16O75716 305 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 CST1P01037 141 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 SBK3P0C264 359 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 AQP1P29972 269 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 BNIP2Q12982 314 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 DSC3Q14574 896 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 C16orf72Q14CZ0 275 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 ZNF549Q6P9A3 640 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 TTC23LQ6PF05 361 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.03□□□□□ -0.96
CALD1-220ENST00000482470 CHST15Q7LFX5 561 aaPredicted RBP9.03□□□□□ -0.96
CALD1-220ENST00000482470 C2orf73Q8N5S3 287 aaPredicted RBP9.03□□□□□ -0.96
CALD1-220ENST00000482470 MDGA1Q8NFP4 955 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 ZNF461Q8TAF7 563 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 SH3RF2Q8TEC5 729 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 TMEM159Q96B96 161 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 SPATA17Q96L03 361 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 PPP3R2Q96LZ3 170 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 PLEKHG4BQ96PX9 1271 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 CHID1Q9BWS9 393 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 BOCQ9BWV1 1114 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 PCDHGA7Q9Y5G6 932 aa9.03□□□□□ -0.96
CALD1-220ENST00000482470 CEP290O15078 2479 aa9.02□□□□□ -0.96
CALD1-220ENST00000482470 A0A087WXM4 84 aa9.02□□□□□ -0.96
CALD1-220ENST00000482470 UPK3BL1B0FP48 263 aa9.02□□□□□ -0.96
CALD1-220ENST00000482470 UPK3BL2E5RIL1 263 aa9.02□□□□□ -0.96
CALD1-220ENST00000482470 SLC22A2O15244 555 aa9.02□□□□□ -0.96
CALD1-220ENST00000482470 LZTS3O60299 673 aaPredicted RBP9.02□□□□□ -0.96
CALD1-220ENST00000482470 CXCL14O95715 111 aa9.02□□□□□ -0.96
CALD1-220ENST00000482470 EPOP01588 193 aa9.02□□□□□ -0.96
CALD1-220ENST00000482470 CAPN3P20807 821 aa9.02□□□□□ -0.96
CALD1-220ENST00000482470 STK19P49842 368 aaPredicted RBP9.02□□□□□ -0.96
CALD1-220ENST00000482470 PTGR1Q14914 329 aa9.02□□□□□ -0.96
CALD1-220ENST00000482470 ACOX1Q15067 660 aa9.02□□□□□ -0.96
CALD1-220ENST00000482470 PLA2G4EQ3MJ16 856 aa9.02□□□□□ -0.96
CALD1-220ENST00000482470 TRMT11Q7Z4G4 463 aaKnown RBP9.02□□□□□ -0.96
CALD1-220ENST00000482470 SYT12Q8IV01 421 aa9.02□□□□□ -0.96
CALD1-220ENST00000482470 SLC15A3Q8IY34 581 aa9.02□□□□□ -0.96
CALD1-220ENST00000482470 ATG16L2Q8NAA4 619 aa9.02□□□□□ -0.96
CALD1-220ENST00000482470 TDRD1Q9BXT4 1180 aaKnown RBP9.02□□□□□ -0.96
CALD1-220ENST00000482470 EBPLQ9BY08 206 aa9.02□□□□□ -0.96
CALD1-220ENST00000482470 MRPS26Q9BYN8 205 aaKnown RBP9.02□□□□□ -0.96
CALD1-220ENST00000482470 MEAF6Q9HAF1 191 aa9.02□□□□□ -0.96
CALD1-220ENST00000482470 DYRK4Q9NR20 520 aa9.02□□□□□ -0.96
CALD1-220ENST00000482470 PNPLA3Q9NST1 481 aa9.02□□□□□ -0.96
CALD1-220ENST00000482470 MGAT4DA6NG13 374 aa9.02□□□□□ -0.97
CALD1-220ENST00000482470 UBFD1O14562 309 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms