RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 GCFC2P16383 781 aaKnown RBP4.11□□□□□ -1.75
VPS41-212ENST00000482217 PRKCHP24723 683 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 ANXA13P27216 316 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 CORO1AP31146 461 aaKnown RBP4.11□□□□□ -1.75
VPS41-212ENST00000482217 CTNNB1P35222 781 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 STARP49675 285 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 GATMP50440 423 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 NAGLUP54802 743 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 ACTR3P61158 418 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 OLR1P78380 273 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 SPIBQ01892 262 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 FHL2Q14192 279 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 KCNJ12Q14500 433 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 ASTE1Q2TB18 679 aaPredicted RBP4.11□□□□□ -1.75
VPS41-212ENST00000482217 TBC1D25Q3MII6 688 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 NADK2Q4G0N4 442 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 FBXO43Q4G163 708 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 BCL7AQ4VC05 210 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 C10orf120Q5SQS8 335 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 DPY19L2P1Q6NXN4 242 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 Q6ZNX1 250 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 ADCK2Q7Z695 626 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 CEP57Q86XR8 500 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 ZNF573Q86YE8 665 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 MMP21Q8N119 569 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 TC2NQ8N9U0 490 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 CCNYQ8ND76 341 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 AGBL3Q8NEM8 1001 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 MBD3L2Q8NHZ7 208 aaPredicted RBP4.11□□□□□ -1.75
VPS41-212ENST00000482217 ELP5Q8TE02 316 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 ABHD5Q8WTS1 349 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 CKAP2Q8WWK9 683 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 SOCS4Q8WXH5 440 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 LINC00476Q8WZB0 136 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 SLC9A6Q92581 669 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 KIAA1143Q96AT1 154 aaPredicted RBP4.11□□□□□ -1.75
VPS41-212ENST00000482217 PGM2Q96G03 612 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 C5orf30Q96GV9 206 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 MSANTD3Q96H12 275 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 PBKQ96KB5 322 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 HIST1H2AAQ96QV6 131 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 PANX2Q96RD6 677 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 ZBTB18Q99592 522 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 FERMT1Q9BQL6 677 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 CLSTN3Q9BQT9 956 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 WDR83Q9BRX9 315 aaKnown RBP4.11□□□□□ -1.75
VPS41-212ENST00000482217 C17orf80Q9BSJ5 609 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 ZNF577Q9BSK1 485 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 TPPP3Q9BW30 176 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 VN1R3Q9BXE9 311 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 FRMD8P1Q9BZ68 369 aaPredicted RBP4.11□□□□□ -1.75
VPS41-212ENST00000482217 GPR88Q9GZN0 384 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 METTL7AQ9H8H3 244 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 KCNK13Q9HB14 408 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 PRMT8Q9NR22 394 aaPredicted RBP4.11□□□□□ -1.75
VPS41-212ENST00000482217 TBC1D13Q9NVG8 400 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 BEX4Q9NWD9 120 aaPredicted RBP4.11□□□□□ -1.75
VPS41-212ENST00000482217 SYBUQ9NX95 663 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 SEC63Q9UGP8 760 aaKnown RBP4.11□□□□□ -1.75
VPS41-212ENST00000482217 TRMT6Q9UJA5 497 aaKnown RBP4.11□□□□□ -1.75
VPS41-212ENST00000482217 USP22Q9UPT9 525 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 GDAQ9Y2T3 454 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 ACEP12821 1306 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 PLEKHG2Q9H7P9 1386 aa4.11□□□□□ -1.75
VPS41-212ENST00000482217 COL4A3Q01955 1670 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 LOC102723996A0A087X1L8 192 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 A1L4Q6 167 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 SAC3D1A6NKF1 404 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.1□□□□□ -1.75
VPS41-212ENST00000482217 ZNF879B4DU55 563 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 GOLGA8SH3BPF8 625 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 MEIS2O14770 477 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 SEPT4O43236 478 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 LIASO43766 372 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 LANCL1O43813 399 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 SCGB2A1O75556 95 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 HEXIM1O94992 359 aaKnown RBP4.1□□□□□ -1.75
VPS41-212ENST00000482217 OR6B1O95007 311 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 ESRRBO95718 433 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 CER1O95813 267 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 SERPINA3P01011 423 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 LCATP04180 440 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 IVLP07476 585 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 RHOP08100 348 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 ERVK-10P10266 1014 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 THRBP10828 461 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 PEPDP12955 493 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 CCDC130P13994 396 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 CD19P15391 556 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 TUBG1P23258 451 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 CTNNA2P26232 953 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 RBL1P28749 1068 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 CCND2P30279 289 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 NUP62P37198 522 aaPredicted RBP4.1□□□□□ -1.75
VPS41-212ENST00000482217 MTHFSP49914 203 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 PLCD1P51178 756 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 SMSP52788 366 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 OAZ1P54368 228 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 ST8SIA6P61647 398 aa4.1□□□□□ -1.75
VPS41-212ENST00000482217 OTUD4Q01804 1114 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms