RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 TMEM126BQ8IUX1 230 aa16.97■□□□□ 0.31
RXRB-203ENST00000481441 SLC34A3Q8N130 599 aa16.97■□□□□ 0.31
RXRB-203ENST00000481441 CISD2Q8N5K1 135 aaKnown RBP16.97■□□□□ 0.31
RXRB-203ENST00000481441 ENDOVQ8N8Q3 282 aaKnown RBP16.97■□□□□ 0.31
RXRB-203ENST00000481441 TMEM102Q8N9M5 508 aaPredicted RBP16.97■□□□□ 0.31
RXRB-203ENST00000481441 GPR150Q8NGU9 434 aa16.97■□□□□ 0.31
RXRB-203ENST00000481441 ZNF653Q96CK0 615 aa16.97■□□□□ 0.31
RXRB-203ENST00000481441 ZNF501Q96CX3 271 aaPredicted RBP16.97■□□□□ 0.31
RXRB-203ENST00000481441 TSGA13Q96PP4 275 aa16.97■□□□□ 0.31
RXRB-203ENST00000481441 TUBB2BQ9BVA1 445 aa16.97■□□□□ 0.31
RXRB-203ENST00000481441 ZFYVE1Q9HBF4 777 aa16.97■□□□□ 0.31
RXRB-203ENST00000481441 KCND1Q9NSA2 647 aa16.97■□□□□ 0.31
RXRB-203ENST00000481441 LIMA1Q9UHB6 759 aaKnown RBP16.97■□□□□ 0.31
RXRB-203ENST00000481441 TCFL5Q9UL49 500 aa16.97■□□□□ 0.31
RXRB-203ENST00000481441 POLQO75417 2590 aa16.97■□□□□ 0.31
RXRB-203ENST00000481441 ANKUB1A6NFN9 424 aa16.96■□□□□ 0.31
RXRB-203ENST00000481441 TLCD2A6NGC4 264 aa16.96■□□□□ 0.31
RXRB-203ENST00000481441 CDK14O94921 469 aa16.96■□□□□ 0.31
RXRB-203ENST00000481441 KLK3P07288 261 aaPredicted RBP16.96■□□□□ 0.31
RXRB-203ENST00000481441 GZMAP12544 262 aa16.96■□□□□ 0.31
RXRB-203ENST00000481441 CCNCP24863 283 aa16.96■□□□□ 0.31
RXRB-203ENST00000481441 ARL4DP49703 201 aa16.96■□□□□ 0.31
RXRB-203ENST00000481441 VAV2P52735 878 aa16.96■□□□□ 0.31
RXRB-203ENST00000481441 SLC25A11Q02978 314 aaKnown RBP16.96■□□□□ 0.31
RXRB-203ENST00000481441 MMRN1Q13201 1228 aa16.96■□□□□ 0.31
RXRB-203ENST00000481441 GPR19Q15760 415 aa16.96■□□□□ 0.31
RXRB-203ENST00000481441 IFI16Q16666 785 aaKnown RBP16.96■□□□□ 0.31
RXRB-203ENST00000481441 DNTTIP2Q5QJE6 756 aaKnown RBP16.96■□□□□ 0.31
RXRB-203ENST00000481441 PLEKHS1Q5SXH7 462 aa16.96■□□□□ 0.31
RXRB-203ENST00000481441 KLHL35Q6PF15 583 aa16.96■□□□□ 0.31
RXRB-203ENST00000481441 ZBTB2Q8N680 514 aa16.96■□□□□ 0.31
RXRB-203ENST00000481441 OR8K5Q8NH50 307 aa16.96■□□□□ 0.31
RXRB-203ENST00000481441 FAM71BQ8TC56 605 aa16.96■□□□□ 0.31
RXRB-203ENST00000481441 CD180Q99467 661 aa16.96■□□□□ 0.31
RXRB-203ENST00000481441 NLNQ9BYT8 704 aa16.96■□□□□ 0.31
RXRB-203ENST00000481441 LATS2Q9NRM7 1088 aa16.96■□□□□ 0.31
RXRB-203ENST00000481441 HAUS2Q9NVX0 235 aa16.96■□□□□ 0.31
RXRB-203ENST00000481441 C5AR2Q9P296 337 aa16.96■□□□□ 0.31
RXRB-203ENST00000481441 MYO1AQ9UBC5 1043 aa16.96■□□□□ 0.31
RXRB-203ENST00000481441 MDC1Q14676 2089 aaKnown RBP16.96■□□□□ 0.31
RXRB-203ENST00000481441 MEN1O00255 615 aa16.96■□□□□ 0.3
RXRB-203ENST00000481441 CAPN1P07384 714 aa16.96■□□□□ 0.3
RXRB-203ENST00000481441 CD48P09326 243 aa16.96■□□□□ 0.3
RXRB-203ENST00000481441 PRF1P14222 555 aa16.96■□□□□ 0.3
RXRB-203ENST00000481441 CD86P42081 329 aa16.96■□□□□ 0.3
RXRB-203ENST00000481441 HALP42357 657 aa16.96■□□□□ 0.3
RXRB-203ENST00000481441 GSDMDP57764 484 aa16.96■□□□□ 0.3
RXRB-203ENST00000481441 PAFAH1B3Q15102 231 aaKnown RBP16.96■□□□□ 0.3
RXRB-203ENST00000481441 PRAMEF17Q5VTA0 474 aa16.96■□□□□ 0.3
RXRB-203ENST00000481441 NCBP2-AS2Q69YL0 99 aa16.96■□□□□ 0.3
RXRB-203ENST00000481441 TMC3Q7Z5M5 1100 aa16.96■□□□□ 0.3
RXRB-203ENST00000481441 DSELQ8IZU8 1212 aa16.96■□□□□ 0.3
RXRB-203ENST00000481441 BARD1Q99728 777 aaKnown RBP16.96■□□□□ 0.3
RXRB-203ENST00000481441 ADGRE3Q9BY15 652 aa16.96■□□□□ 0.3
RXRB-203ENST00000481441 MRPL47Q9HD33 250 aaKnown RBP16.96■□□□□ 0.3
RXRB-203ENST00000481441 TMPRSS11EQ9UL52 423 aa16.96■□□□□ 0.3
RXRB-203ENST00000481441 MYO6Q9UM54 1294 aa16.96■□□□□ 0.3
RXRB-203ENST00000481441 B3GNT3Q9Y2A9 372 aa16.96■□□□□ 0.3
RXRB-203ENST00000481441 OTOGQ6ZRI0 2925 aa16.95■□□□□ 0.3
RXRB-203ENST00000481441 F8P00451 2351 aa16.95■□□□□ 0.3
RXRB-203ENST00000481441 UBA6A0AVT1 1052 aaPredicted RBP16.95■□□□□ 0.3
RXRB-203ENST00000481441 OR5K3A6NET4 321 aa16.95■□□□□ 0.3
RXRB-203ENST00000481441 LRRC10BA6NIK2 292 aa16.95■□□□□ 0.3
RXRB-203ENST00000481441 VCLP18206 1134 aa16.95■□□□□ 0.3
RXRB-203ENST00000481441 RORAP35398 523 aa16.95■□□□□ 0.3
RXRB-203ENST00000481441 RRADP55042 308 aa16.95■□□□□ 0.3
RXRB-203ENST00000481441 RAPSNQ13702 412 aa16.95■□□□□ 0.3
RXRB-203ENST00000481441 ATP1A4Q13733 1029 aa16.95■□□□□ 0.3
RXRB-203ENST00000481441 GALNT3Q14435 633 aa16.95■□□□□ 0.3
RXRB-203ENST00000481441 PIGHQ14442 188 aaPredicted RBP16.95■□□□□ 0.3
RXRB-203ENST00000481441 KRT81Q14533 505 aa16.95■□□□□ 0.3
RXRB-203ENST00000481441 RPE65Q16518 533 aa16.95■□□□□ 0.3
RXRB-203ENST00000481441 CRB2Q5IJ48 1285 aa16.95■□□□□ 0.3
RXRB-203ENST00000481441 CCDC122Q5T0U0 273 aa16.95■□□□□ 0.3
RXRB-203ENST00000481441 ZNF571Q7Z3V5 609 aaPredicted RBP16.95■□□□□ 0.3
RXRB-203ENST00000481441 LRRN4Q8WUT4 740 aa16.95■□□□□ 0.3
RXRB-203ENST00000481441 TRIB3Q96RU7 358 aa16.95■□□□□ 0.3
RXRB-203ENST00000481441 HAUS4Q9H6D7 363 aa16.95■□□□□ 0.3
RXRB-203ENST00000481441 RAD18Q9NS91 495 aa16.95■□□□□ 0.3
RXRB-203ENST00000481441 SHOC2Q9UQ13 582 aa16.95■□□□□ 0.3
RXRB-203ENST00000481441 APCP25054 2843 aa16.94■□□□□ 0.3
RXRB-203ENST00000481441 DDX3XO00571 662 aaKnown RBP eCLIP16.94■□□□□ 0.3
RXRB-203ENST00000481441 ZBTB11O95625 1053 aaPredicted RBP16.94■□□□□ 0.3
RXRB-203ENST00000481441 PIRTP0C851 137 aa16.94■□□□□ 0.3
RXRB-203ENST00000481441 MYBL1P10243 752 aa16.94■□□□□ 0.3
RXRB-203ENST00000481441 VWA5B1Q5TIE3 1220 aa16.94■□□□□ 0.3
RXRB-203ENST00000481441 FAM198BQ6UWH4 519 aa16.94■□□□□ 0.3
RXRB-203ENST00000481441 APTXQ7Z2E3 356 aaKnown RBP16.94■□□□□ 0.3
RXRB-203ENST00000481441 NIPA2Q8N8Q9 360 aa16.94■□□□□ 0.3
RXRB-203ENST00000481441 ANKRD20A12PQ8NF67 263 aa16.94■□□□□ 0.3
RXRB-203ENST00000481441 CPT1BQ92523 772 aa16.94■□□□□ 0.3
RXRB-203ENST00000481441 MARVELD3Q96A59 401 aa16.94■□□□□ 0.3
RXRB-203ENST00000481441 TRIM11Q96F44 468 aa16.94■□□□□ 0.3
RXRB-203ENST00000481441 NAT10Q9H0A0 1025 aaKnown RBP16.94■□□□□ 0.3
RXRB-203ENST00000481441 RBSNQ9H1K0 784 aa16.94■□□□□ 0.3
RXRB-203ENST00000481441 MAGEE1Q9HCI5 957 aa16.94■□□□□ 0.3
RXRB-203ENST00000481441 HNRNPRO43390 633 aaKnown RBP16.93■□□□□ 0.3
RXRB-203ENST00000481441 KCNJ13O60928 360 aa16.93■□□□□ 0.3
RXRB-203ENST00000481441 KRT38O76015 456 aa16.93■□□□□ 0.3
RXRB-203ENST00000481441 BPIP17213 487 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms