RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 STMND1H3BQB6 276 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 SELENOFO60613 162 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 SOCS5O75159 536 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 ZNF217O75362 1048 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 EGFP01133 1207 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 NHLRC4P0CG21 123 aaPredicted RBP5.22□□□□□ -1.57
COPA-203ENST00000481040 TKTP29401 623 aaKnown RBP5.22□□□□□ -1.57
COPA-203ENST00000481040 TIA1P31483 386 aaKnown RBP eCLIP5.22□□□□□ -1.57
COPA-203ENST00000481040 RARRES1P49788 294 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 RAD23BP54727 409 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 CASP9P55211 416 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 CDH12P55289 794 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 TPD52P55327 224 aaPredicted RBP5.22□□□□□ -1.57
COPA-203ENST00000481040 DGCR2P98153 550 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 MAD2L1Q13257 205 aaPredicted RBP5.22□□□□□ -1.57
COPA-203ENST00000481040 STIM1Q13586 685 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 SGCBQ16585 318 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 DCAF6Q58WW2 860 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 ZNF813Q6ZN06 617 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 AMIGO2Q86SJ2 522 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 TTC9BQ8N6N2 239 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 MRPL43Q8N983 215 aaKnown RBP5.22□□□□□ -1.57
COPA-203ENST00000481040 TEX45Q8NA69 505 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 ARRDC2Q8TBH0 407 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 GPT2Q8TD30 523 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 NSMAFQ92636 917 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 BCL2L2Q92843 193 aaPredicted RBP5.22□□□□□ -1.57
COPA-203ENST00000481040 SLAMF9Q96A28 289 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 EME1Q96AY2 570 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 ERLEC1Q96DZ1 483 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 OTUB1Q96FW1 271 aaPredicted RBP5.22□□□□□ -1.57
COPA-203ENST00000481040 RUFY1Q96T51 708 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 GFI1Q99684 422 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 SH3GL2Q99962 352 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 HSD3B7Q9H2F3 369 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 FN3KQ9H479 309 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 SEBOXQ9HB31 216 aaPredicted RBP5.22□□□□□ -1.57
COPA-203ENST00000481040 IL17RBQ9NRM6 502 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 COMMD8Q9NX08 183 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 FBXW2Q9UKT8 454 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 RPH3AQ9Y2J0 694 aaPredicted RBP5.22□□□□□ -1.57
COPA-203ENST00000481040 SQORQ9Y6N5 450 aa5.22□□□□□ -1.57
COPA-203ENST00000481040 FEZF1A0PJY2 475 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 RGSL1A5PLK6 1076 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 ANKUB1A6NFN9 424 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 SDR42E2A6NKP2 422 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 HEPACAM2A8MVW5 462 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 MGST3O14880 152 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 MATN3O15232 486 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 SSX4O60224 188 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 TSPAN1O60635 241 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 MED24O75448 989 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 SLC16A8O95907 504 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 RAB40ALP0C0E4 278 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 ACAT1P24752 427 aaKnown RBP5.21□□□□□ -1.58
COPA-203ENST00000481040 HRH2P25021 359 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 HOXD9P28356 352 aaPredicted RBP5.21□□□□□ -1.58
COPA-203ENST00000481040 PIGAP37287 484 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 AVPR1AP37288 418 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 PLA2G5P39877 138 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 FRKP42685 505 aaPredicted RBP5.21□□□□□ -1.58
COPA-203ENST00000481040 ME1P48163 572 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 PPP3CCP48454 512 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 SNRPEP62304 92 aaKnown RBP5.21□□□□□ -1.58
COPA-203ENST00000481040 POLR2LP62875 67 aaKnown RBP5.21□□□□□ -1.58
COPA-203ENST00000481040 HTD2P86397 168 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 NR1D2Q14995 579 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 SLC39A14Q15043 492 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 PDK1Q15118 436 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 AARDQ4LEZ3 155 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 ZNF789Q5FWF6 425 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 ZDHHC20Q5W0Z9 365 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 ALS2CLQ60I27 953 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 LCN10Q6JVE6 187 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 CASC4Q6P4E1 433 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 CAMK1DQ8IU85 385 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 C4orf19Q8IY42 314 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 ZBTB44Q8NCP5 570 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 NEK11Q8NG66 645 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 RAD54LQ92698 747 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 GRAMD2BQ96HH9 432 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 OR6C1Q96RD1 312 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 TSPAN18Q96SJ8 248 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 CDK5RAP1Q96SZ6 601 aaKnown RBP5.21□□□□□ -1.58
COPA-203ENST00000481040 FEVQ99581 238 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 TIMP4Q99727 224 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 CPNE1Q99829 537 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 MOV10L1Q9BXT6 1211 aaKnown RBP5.21□□□□□ -1.58
COPA-203ENST00000481040 KLHL31Q9H511 634 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 TBC1D17Q9HA65 648 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 LMAN1LQ9HAT1 526 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 CPNE5Q9HCH3 593 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 MMP25Q9NPA2 562 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 SMPD4Q9NXE4 827 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 MCM9Q9NXL9 1143 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 TAS2R3Q9NYW6 316 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 FLRT1Q9NZU1 646 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 TBC1D7Q9P0N9 293 aa5.21□□□□□ -1.58
COPA-203ENST00000481040 AGO2Q9UKV8 859 aaKnown RBP5.21□□□□□ -1.58
COPA-203ENST00000481040 B3GALT5Q9Y2C3 310 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms