RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 GKP32189 559 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 SF3B4Q15427 424 aaKnown RBP eCLIP16.61■□□□□ 0.257e-7■■■■□ 24
SH3D21-203ENST00000480549 PTPRNQ16849 979 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 CTSL3PQ5NE16 218 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 NANOGP8Q6NSW7 305 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 CMTM8Q8IZV2 173 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 RAD9AQ99638 391 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 TAS2R13Q9NYV9 303 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 GTSE1Q9NYZ3 720 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 IKZF3Q9UKT9 509 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 OAS3Q9Y6K5 1087 aaKnown RBP16.61■□□□□ 0.25
SH3D21-203ENST00000480549 UBFD1O14562 309 aaKnown RBP16.61■□□□□ 0.25
SH3D21-203ENST00000480549 RFPL2O75678 378 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 HMGCLP35914 325 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 BMPR1AP36894 532 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 TTPAP49638 278 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 FPGSQ05932 587 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 KCNJ8Q15842 424 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 DGKKQ5KSL6 1271 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 DHRS4L2Q6PKH6 230 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 XKR5Q6UX68 686 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 RYBPQ8N488 228 aaPredicted RBP16.61■□□□□ 0.25
SH3D21-203ENST00000480549 USP13Q92995 863 aaPredicted RBP16.61■□□□□ 0.25
SH3D21-203ENST00000480549 BORCS5Q969J3 196 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 CMTM5Q96DZ9 223 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 THAP11Q96EK4 314 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 SLC30A3Q99726 388 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 TFB2MQ9H5Q4 396 aaKnown RBP16.61■□□□□ 0.25
SH3D21-203ENST00000480549 SDHDO14521 159 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 GPR39O43194 453 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 PEX1O43933 1283 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 CTNNB1P35222 781 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 GSSP48637 474 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 LRP8Q14114 963 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 NR1D2Q14995 579 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 UNC50Q53HI1 259 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 ZRANB3Q5FWF4 1079 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 NIPAL1Q6NVV3 410 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 CUZD1Q86UP6 607 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 CPSF7Q8N684 471 aaKnown RBP16.61■□□□□ 0.25
SH3D21-203ENST00000480549 GPR21Q99679 349 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 DERL2Q9GZP9 239 aa16.61■□□□□ 0.25
SH3D21-203ENST00000480549 FNDC3AQ9Y2H6 1198 aaKnown RBP16.61■□□□□ 0.25
SH3D21-203ENST00000480549 A8MU76 341 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 J3QRK9 145 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 CTSOP43234 321 aaPredicted RBP16.6■□□□□ 0.25
SH3D21-203ENST00000480549 RPL26P61254 145 aaKnown RBP16.6■□□□□ 0.25
SH3D21-203ENST00000480549 PPP2R2DQ66LE6 453 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 TSPAN14Q8NG11 270 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 POF1BQ8WVV4 589 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 FBXL8Q96CD0 374 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 TNKS2Q9H2K2 1166 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 PARVBQ9HBI1 364 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 EML4Q9HC35 981 aaKnown RBP16.6■□□□□ 0.25
SH3D21-203ENST00000480549 SYTL2Q9HCH5 934 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 EBF1Q9UH73 591 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 VPS9D1Q9Y2B5 631 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 CHD7Q9P2D1 2997 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 LAMA3Q16787 3333 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.6■□□□□ 0.25
SH3D21-203ENST00000480549 A6NL46 340 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 NOTOA8MTQ0 251 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 UBXN8O00124 270 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 COX4I1P13073 169 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 PKMP14618 531 aaKnown RBP16.6■□□□□ 0.25
SH3D21-203ENST00000480549 HLA-FP30511 346 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 HMOX2P30519 316 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 HERVK_113P63132 956 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 BCL2L1Q07817 233 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 CDKN3Q16667 212 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 PITRM1Q5JRX3 1037 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 TMEM198Q66K66 360 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 SPPL3Q8TCT6 385 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 EME1Q96AY2 570 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 ERVK-6Q9BXR3 956 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 GPR63Q9BZJ6 419 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 CCDC68Q9H2F9 335 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 GID8Q9NWU2 228 aa16.6■□□□□ 0.25
SH3D21-203ENST00000480549 A0A0J9YYE9 177 aa16.59■□□□□ 0.25
SH3D21-203ENST00000480549 TRBC1P01850 177 aa16.59■□□□□ 0.25
SH3D21-203ENST00000480549 CD9P21926 228 aa16.59■□□□□ 0.25
SH3D21-203ENST00000480549 TEAD2Q15562 447 aa16.59■□□□□ 0.25
SH3D21-203ENST00000480549 CLVS1Q8IUQ0 354 aaPredicted RBP16.59■□□□□ 0.25
SH3D21-203ENST00000480549 GRIN3AQ8TCU5 1115 aa16.59■□□□□ 0.25
SH3D21-203ENST00000480549 EXT2Q93063 718 aa16.59■□□□□ 0.25
SH3D21-203ENST00000480549 KIAA1191Q96A73 305 aa16.59■□□□□ 0.25
SH3D21-203ENST00000480549 LENG8Q96PV6 779 aaPredicted RBP16.59■□□□□ 0.25
SH3D21-203ENST00000480549 PKP3Q9Y446 797 aa16.59■□□□□ 0.25
SH3D21-203ENST00000480549 LOC100653049A0A140TA62 436 aa16.59■□□□□ 0.25
SH3D21-203ENST00000480549 TRPC5OSA6NMA1 111 aa16.59■□□□□ 0.25
SH3D21-203ENST00000480549 GAPDHSO14556 408 aaPredicted RBP16.59■□□□□ 0.25
SH3D21-203ENST00000480549 SOCS5O75159 536 aa16.59■□□□□ 0.25
SH3D21-203ENST00000480549 NIPSNAP2O75323 286 aa16.59■□□□□ 0.25
SH3D21-203ENST00000480549 KRT34O76011 436 aa16.59■□□□□ 0.25
SH3D21-203ENST00000480549 SRCP12931 536 aa16.59■□□□□ 0.25
SH3D21-203ENST00000480549 STK19P49842 368 aaPredicted RBP16.59■□□□□ 0.25
SH3D21-203ENST00000480549 CCT8P50990 548 aa16.59■□□□□ 0.25
SH3D21-203ENST00000480549 RAB15P59190 212 aa16.59■□□□□ 0.25
SH3D21-203ENST00000480549 FAM219BQ5XKK7 198 aa16.59■□□□□ 0.25
SH3D21-203ENST00000480549 ASTLQ6HA08 431 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms