RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 TRIM38O00635 465 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 YY2O15391 372 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 GRID2O43424 1007 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 VEGFDO43915 354 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 DFNA5O60443 496 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 C1QL1O75973 258 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 RASGRP1O95267 797 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 TTC4O95801 387 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 EML2O95834 649 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 PRB1P04280 392 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 ATP1B2P14415 290 aaPredicted RBP12.05□□□□□ -0.48
TRA2B-212ENST00000480461 AK4P27144 223 aaPredicted RBP12.05□□□□□ -0.48
TRA2B-212ENST00000480461 EPHA8P29322 1005 aaPredicted RBP12.05□□□□□ -0.48
TRA2B-212ENST00000480461 CTBSQ01459 385 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 SLC14A1Q13336 389 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 CUL1Q13616 776 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 FRG1Q14331 258 aaKnown RBP12.05□□□□□ -0.48
TRA2B-212ENST00000480461 HLTFQ14527 1009 aaKnown RBP eCLIP12.05□□□□□ -0.48
TRA2B-212ENST00000480461 KYNUQ16719 465 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 ZNF658BQ4V348 819 aaPredicted RBP12.05□□□□□ -0.48
TRA2B-212ENST00000480461 TEDDM1Q5T9Z0 273 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 CRTC3Q6UUV7 619 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 CAPN12Q6ZSI9 719 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 C3orf62Q6ZUJ4 267 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 CHST15Q7LFX5 561 aaPredicted RBP12.05□□□□□ -0.48
TRA2B-212ENST00000480461 CILP2Q8IUL8 1156 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 RELL1Q8IUW5 271 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 CCNJLQ8IV13 435 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 GSPT2Q8IYD1 628 aaKnown RBP12.05□□□□□ -0.48
TRA2B-212ENST00000480461 ZNF548Q8NEK5 533 aaPredicted RBP12.05□□□□□ -0.48
TRA2B-212ENST00000480461 GPBAR1Q8TDU6 330 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 LMX1AQ8TE12 382 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 ULK4Q96C45 1275 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 COPS8Q99627 209 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 TXLNGYQ9BZA5 131 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 P2RY12Q9H244 342 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 IARS2Q9NSE4 1012 aaKnown RBP12.05□□□□□ -0.48
TRA2B-212ENST00000480461 SPATS2LQ9NUQ6 558 aaKnown RBP12.05□□□□□ -0.48
TRA2B-212ENST00000480461 DKK4Q9UBT3 224 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 APOBEC3BQ9UH17 382 aaKnown RBP12.05□□□□□ -0.48
TRA2B-212ENST00000480461 ZNF106Q9H2Y7 1883 aaKnown RBP12.05□□□□□ -0.48
TRA2B-212ENST00000480461 CFAP46Q8IYW2 2715 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 PTPRBP23467 1997 aa12.05□□□□□ -0.48
TRA2B-212ENST00000480461 TMEM131Q92545 1883 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 IQCF5A8MTL0 148 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 PCDHGA12O60330 932 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 POP7O75817 140 aaKnown RBP12.04□□□□□ -0.48
TRA2B-212ENST00000480461 HAUS5O94927 633 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 CER1O95813 267 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 ZNF883P0CG24 379 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 MYF5P13349 255 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 MSH3P20585 1137 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 ARRB1P49407 418 aaPredicted RBP12.04□□□□□ -0.48
TRA2B-212ENST00000480461 HNRNPKP61978 463 aaKnown RBP eCLIP12.04□□□□□ -0.48
TRA2B-212ENST00000480461 TYSND1Q2T9J0 566 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 ZNF549Q6P9A3 640 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 CERS6Q6ZMG9 384 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 FAM83HQ6ZRV2 1179 aaPredicted RBP12.04□□□□□ -0.48
TRA2B-212ENST00000480461 KCNMB4Q86W47 210 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 PALM2Q8IXS6 379 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 LILRA3Q8N6C8 439 aaPredicted RBP12.04□□□□□ -0.48
TRA2B-212ENST00000480461 LPGAT1Q92604 370 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 CERS2Q96G23 380 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 BIRC8Q96P09 236 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 FMO2Q99518 471 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 FAM129AQ9BZQ8 928 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 SLC13A1Q9BZW2 595 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 PHACTR1Q9C0D0 580 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 RMI1Q9H9A7 625 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 TRNAU1APQ9NX07 287 aaKnown RBP12.04□□□□□ -0.48
TRA2B-212ENST00000480461 NINJ2Q9NZG7 142 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 GALPQ9UBC7 116 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 FBXO5Q9UKT4 447 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 GPR34Q9UPC5 381 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 APOBEC2Q9Y235 224 aaKnown RBP12.04□□□□□ -0.48
TRA2B-212ENST00000480461 PSAT1Q9Y617 370 aa12.04□□□□□ -0.48
TRA2B-212ENST00000480461 A0A087WV48 116 aa12.03□□□□□ -0.48
TRA2B-212ENST00000480461 TCRBV9S1A1TA0A576 114 aa12.03□□□□□ -0.48
TRA2B-212ENST00000480461 GPR89AB7ZAQ6 455 aa12.03□□□□□ -0.48
TRA2B-212ENST00000480461 LMO7DNF2Z398 122 aa12.03□□□□□ -0.48
TRA2B-212ENST00000480461 AQP9O43315 295 aa12.03□□□□□ -0.48
TRA2B-212ENST00000480461 CBFA2T3O75081 653 aa12.03□□□□□ -0.48
TRA2B-212ENST00000480461 AHSGP02765 367 aa12.03□□□□□ -0.48
TRA2B-212ENST00000480461 GPR89BP0CG08 455 aa12.03□□□□□ -0.48
TRA2B-212ENST00000480461 ACP5P13686 325 aa12.03□□□□□ -0.48
TRA2B-212ENST00000480461 ZNF7P17097 686 aaPredicted RBP12.03□□□□□ -0.48
TRA2B-212ENST00000480461 PAMP19021 973 aa12.03□□□□□ -0.48
TRA2B-212ENST00000480461 AKT1P31749 480 aa12.03□□□□□ -0.48
TRA2B-212ENST00000480461 SLC1A2P43004 574 aa12.03□□□□□ -0.48
TRA2B-212ENST00000480461 VSNL1P62760 191 aa12.03□□□□□ -0.48
TRA2B-212ENST00000480461 MPP1Q00013 466 aa12.03□□□□□ -0.48
TRA2B-212ENST00000480461 TIAL1Q01085 375 aaKnown RBP eCLIP12.03□□□□□ -0.48
TRA2B-212ENST00000480461 C19orf57Q0VDD7 668 aa12.03□□□□□ -0.48
TRA2B-212ENST00000480461 ITIH4Q14624 930 aa12.03□□□□□ -0.48
TRA2B-212ENST00000480461 DEFB133Q30KQ1 61 aa12.03□□□□□ -0.48
TRA2B-212ENST00000480461 CTSL3PQ5NE16 218 aa12.03□□□□□ -0.48
TRA2B-212ENST00000480461 LYPLAL1Q5VWZ2 237 aa12.03□□□□□ -0.48
TRA2B-212ENST00000480461 ZNF470Q6ECI4 717 aa12.03□□□□□ -0.48
TRA2B-212ENST00000480461 CNSTQ6PJW8 725 aa12.03□□□□□ -0.48
TRA2B-212ENST00000480461 PACS1Q6VY07 963 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms