RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 PRLHRP49683 370 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 RPL6Q02878 288 aaKnown RBP17.31■□□□□ 0.36
UPF3A-206ENST00000480362 FAM83EQ2M2I3 478 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 TSNAXIP1Q2TAA8 658 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 BCL7AQ4VC05 210 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 AGAP9Q5VTM2 703 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 LVRNQ6Q4G3 990 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 KYAT3Q6YP21 454 aaKnown RBP17.31■□□□□ 0.36
UPF3A-206ENST00000480362 GCNT7Q6ZNI0 430 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 OTOAQ7RTW8 1153 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 C1orf210Q8IVY1 113 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 CPNE9Q8IYJ1 553 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 NKAPQ8N5F7 415 aaKnown RBP17.31■□□□□ 0.36
UPF3A-206ENST00000480362 ZBTB2Q8N680 514 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 CADM4Q8NFZ8 388 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 EEF1AKMT1Q8WVE0 214 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 SNX19Q92543 992 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 ZNF514Q96K75 400 aaPredicted RBP17.31■□□□□ 0.36
UPF3A-206ENST00000480362 GPR78Q96P69 363 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 CCM2Q9BSQ5 444 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 UNKQ9C0B0 810 aaKnown RBP17.31■□□□□ 0.36
UPF3A-206ENST00000480362 KLHL42Q9P2K6 505 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 EMCNQ9ULC0 261 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 GPR34Q9UPC5 381 aa17.31■□□□□ 0.36
UPF3A-206ENST00000480362 A0A1W2PPC4 97 aa17.3■□□□□ 0.36
UPF3A-206ENST00000480362 H0Y8X5 98 aa17.3■□□□□ 0.36
UPF3A-206ENST00000480362 KPNA5O15131 536 aa17.3■□□□□ 0.36
UPF3A-206ENST00000480362 NUAK1O60285 661 aa17.3■□□□□ 0.36
UPF3A-206ENST00000480362 PLIN3O60664 434 aa17.3■□□□□ 0.36
UPF3A-206ENST00000480362 LILRB5O75023 590 aa17.3■□□□□ 0.36
UPF3A-206ENST00000480362 TDGF1P13385 188 aa17.3■□□□□ 0.36
UPF3A-206ENST00000480362 GLRBP48167 497 aa17.3■□□□□ 0.36
UPF3A-206ENST00000480362 WDR4P57081 412 aaKnown RBP17.3■□□□□ 0.36
UPF3A-206ENST00000480362 IL2P60568 153 aa17.3■□□□□ 0.36
UPF3A-206ENST00000480362 PFN3P60673 137 aa17.3■□□□□ 0.36
UPF3A-206ENST00000480362 IRX4P78413 519 aa17.3■□□□□ 0.36
UPF3A-206ENST00000480362 TRAPPC5Q8IUR0 188 aa17.3■□□□□ 0.36
UPF3A-206ENST00000480362 TMEM145Q8NBT3 493 aa17.3■□□□□ 0.36
UPF3A-206ENST00000480362 ELMO1Q92556 727 aa17.3■□□□□ 0.36
UPF3A-206ENST00000480362 SCYL1Q96KG9 808 aa17.3■□□□□ 0.36
UPF3A-206ENST00000480362 PAIP2Q9BPZ3 127 aaKnown RBP17.3■□□□□ 0.36
UPF3A-206ENST00000480362 NMRAL1Q9HBL8 299 aa17.3■□□□□ 0.36
UPF3A-206ENST00000480362 INTS9Q9NV88 658 aaKnown RBP17.3■□□□□ 0.36
UPF3A-206ENST00000480362 BPTFQ12830 3046 aa17.3■□□□□ 0.36
UPF3A-206ENST00000480362 TMEM202A6NGA9 273 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 CHUKO15111 745 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 PROCP04070 461 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 CEACAM5P06731 702 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 CD1DP15813 335 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 BCKDHBP21953 392 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 DGKAP23743 735 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 ETV4P43268 484 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 KIAA1024LP59773 190 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 CSTF1Q05048 431 aaKnown RBP17.29■□□□□ 0.36
UPF3A-206ENST00000480362 TTLL9Q3SXZ7 439 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 CCDC153Q494R4 210 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 ACSBG2Q5FVE4 666 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 HHATQ5VTY9 493 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 LRRC8EQ6NSJ5 796 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 KLC3Q6P597 504 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 CRTC3Q6UUV7 619 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 WDR5BQ86VZ2 330 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 ZNF547Q8IVP9 402 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 MAML2Q8IZL2 1156 aaPredicted RBP17.29■□□□□ 0.36
UPF3A-206ENST00000480362 DTWD2Q8NBA8 298 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 ARMC2Q8NEN0 867 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 LINGO1Q96FE5 620 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 ORAI3Q9BRQ5 295 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 FAM126AQ9BYI3 521 aaPredicted RBP17.29■□□□□ 0.36
UPF3A-206ENST00000480362 DERL2Q9GZP9 239 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 SLC17A4Q9Y2C5 497 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 PRKAB1Q9Y478 270 aa17.29■□□□□ 0.36
UPF3A-206ENST00000480362 PCYT1BQ9Y5K3 369 aaPredicted RBP17.29■□□□□ 0.36
UPF3A-206ENST00000480362 PLXND1Q9Y4D7 1925 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 GPR89AB7ZAQ6 455 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 TOR1BO14657 336 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 GRID2O43424 1007 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 ZBTB14O43829 449 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 POP7O75817 140 aaKnown RBP17.28■□□□□ 0.36
UPF3A-206ENST00000480362 TSPAN12O95859 305 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 FUCA1P04066 466 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 APOA4P06727 396 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 GPR89BP0CG08 455 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 TFEBP19484 476 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 CD27P26842 260 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 PBLDP30039 288 aaPredicted RBP17.28■□□□□ 0.36
UPF3A-206ENST00000480362 RGS4P49798 205 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 KPNA2P52292 529 aaKnown RBP17.28■□□□□ 0.36
UPF3A-206ENST00000480362 ATP6V0D1P61421 351 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 YPEL5P62699 121 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 HSPA14Q0VDF9 509 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 BOP1Q14137 746 aaKnown RBP17.28■□□□□ 0.36
UPF3A-206ENST00000480362 NFATC4Q14934 902 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 ACAP2Q15057 778 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 PLEKHS1Q5SXH7 462 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 Q6ZSR6 202 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 ABI3BPQ7Z7G0 1075 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 LRRTM4Q86VH4 590 aa17.28■□□□□ 0.36
UPF3A-206ENST00000480362 FSTL5Q8N475 847 aaPredicted RBP17.28■□□□□ 0.36
UPF3A-206ENST00000480362 CCDC63Q8NA47 563 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms