RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 SIDT1Q9NXL6 827 aaKnown RBP17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 PKP3Q9Y446 797 aa17.06■□□□□ 0.32
ECHDC1-216ENST00000479525 GRID2IPA4D2P6 1211 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 HACD1B0YJ81 288 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 POLR1CO15160 346 aaPredicted RBP17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 PJA2O43164 708 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 PRAMEF1O95521 474 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 PRSS56P0CW18 603 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 RBP3P10745 1247 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 PYGMP11217 842 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 ITGB6P18564 788 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 HLA-DPA1P20036 260 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 CTNNA2P26232 953 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 ARCN1P48444 511 aaKnown RBP17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 GEMP55040 296 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 RAB15P59190 212 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 KCNAB1Q14722 419 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 ANKRD20A2Q5SQ80 823 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 ANKRD20A1Q5TYW2 823 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 ANKRD20A3Q5VUR7 823 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 C16orf46Q6P387 395 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 DARS2Q6PI48 645 aaKnown RBP17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 ABRAXAS1Q6UWZ7 409 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 PTRH1Q86Y79 214 aaKnown RBP17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 PLXDC1Q8IUK5 500 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 NLGN4XQ8N0W4 816 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 SPDYE1Q8NFV5 336 aaPredicted RBP17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 NLGN4YQ8NFZ3 816 aaPredicted RBP17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 OR6C1Q96RD1 312 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 NRTNQ99748 197 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 DESI2Q9BSY9 194 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 ASPSCR1Q9BZE9 553 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 SPRY4Q9C004 299 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 GPN2Q9H9Y4 310 aaPredicted RBP17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 SLC40A1Q9NP59 571 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 PCDHA3Q9Y5H8 950 aa17.05■□□□□ 0.32
ECHDC1-216ENST00000479525 CCDC78A2IDD5 438 aa17.04■□□□□ 0.32
ECHDC1-216ENST00000479525 GPR89AB7ZAQ6 455 aa17.04■□□□□ 0.32
ECHDC1-216ENST00000479525 MTSS1O43312 755 aa17.04■□□□□ 0.32
ECHDC1-216ENST00000479525 C9P02748 559 aa17.04■□□□□ 0.32
ECHDC1-216ENST00000479525 GPR89BP0CG08 455 aa17.04■□□□□ 0.32
ECHDC1-216ENST00000479525 F8A1P23610 371 aa17.04■□□□□ 0.32
ECHDC1-216ENST00000479525 RPE65Q16518 533 aa17.04■□□□□ 0.32
ECHDC1-216ENST00000479525 CACHD1Q5VU97 1274 aa17.04■□□□□ 0.32
ECHDC1-216ENST00000479525 FBXO38Q6PIJ6 1188 aa17.04■□□□□ 0.32
ECHDC1-216ENST00000479525 AMZ2Q86W34 360 aa17.04■□□□□ 0.32
ECHDC1-216ENST00000479525 GAS2L3Q86XJ1 694 aa17.04■□□□□ 0.32
ECHDC1-216ENST00000479525 WWP1Q9H0M0 922 aa17.04■□□□□ 0.32
ECHDC1-216ENST00000479525 TRABDQ9H4I3 376 aa17.04■□□□□ 0.32
ECHDC1-216ENST00000479525 POT1Q9NUX5 634 aa17.04■□□□□ 0.32
ECHDC1-216ENST00000479525 IMP3Q9NV31 184 aaKnown RBP17.04■□□□□ 0.32
ECHDC1-216ENST00000479525 KIAA0754O94854 1291 aa17.03■□□□□ 0.32
ECHDC1-216ENST00000479525 TIAF1O95411 115 aa17.03■□□□□ 0.32
ECHDC1-216ENST00000479525 FTCDO95954 541 aa17.03■□□□□ 0.32
ECHDC1-216ENST00000479525 MSH3P20585 1137 aa17.03■□□□□ 0.32
ECHDC1-216ENST00000479525 ADRA1AP35348 466 aa17.03■□□□□ 0.32
ECHDC1-216ENST00000479525 CAPZBP47756 277 aa17.03■□□□□ 0.32
ECHDC1-216ENST00000479525 CDKN1CP49918 316 aaPredicted RBP17.03■□□□□ 0.32
ECHDC1-216ENST00000479525 XKR5Q6UX68 686 aa17.03■□□□□ 0.32
ECHDC1-216ENST00000479525 GALNT6Q8NCL4 622 aa17.03■□□□□ 0.32
ECHDC1-216ENST00000479525 DDHD1Q8NEL9 900 aa17.03■□□□□ 0.32
ECHDC1-216ENST00000479525 ZNF398Q8TD17 642 aa17.03■□□□□ 0.32
ECHDC1-216ENST00000479525 PPM1MQ96MI6 270 aa17.03■□□□□ 0.32
ECHDC1-216ENST00000479525 SRPK1Q96SB4 655 aaKnown RBP17.03■□□□□ 0.32
ECHDC1-216ENST00000479525 VAT1Q99536 393 aa17.03■□□□□ 0.32
ECHDC1-216ENST00000479525 ULBP3Q9BZM4 244 aa17.03■□□□□ 0.32
ECHDC1-216ENST00000479525 FAM117AQ9C073 453 aa17.03■□□□□ 0.32
ECHDC1-216ENST00000479525 B3GNT4Q9C0J1 378 aa17.03■□□□□ 0.32
ECHDC1-216ENST00000479525 ASB8Q9H765 288 aa17.03■□□□□ 0.32
ECHDC1-216ENST00000479525 FBXO8Q9NRD0 319 aa17.03■□□□□ 0.32
ECHDC1-216ENST00000479525 HACD3Q9P035 362 aa17.03■□□□□ 0.32
ECHDC1-216ENST00000479525 TRHDEQ9UKU6 1024 aa17.03■□□□□ 0.32
ECHDC1-216ENST00000479525 TNRC6AQ8NDV7 1962 aaKnown RBP17.03■□□□□ 0.32
ECHDC1-216ENST00000479525 IGHV5-51A0A0C4DH38 117 aa17.02■□□□□ 0.32
ECHDC1-216ENST00000479525 TCRBV7S2A1N4TA0A589 114 aa17.02■□□□□ 0.32
ECHDC1-216ENST00000479525 DLGAP3O95886 979 aa17.02■□□□□ 0.32
ECHDC1-216ENST00000479525 EPOP01588 193 aa17.02■□□□□ 0.32
ECHDC1-216ENST00000479525 ITGB2P05107 769 aa17.02■□□□□ 0.32
ECHDC1-216ENST00000479525 POLBP06746 335 aa17.02■□□□□ 0.32
ECHDC1-216ENST00000479525 OAS2P29728 719 aaKnown RBP17.02■□□□□ 0.32
ECHDC1-216ENST00000479525 HALP42357 657 aa17.02■□□□□ 0.32
ECHDC1-216ENST00000479525 XRCC4Q13426 336 aa17.02■□□□□ 0.32
ECHDC1-216ENST00000479525 PLCL1Q15111 1095 aa17.02■□□□□ 0.32
ECHDC1-216ENST00000479525 LDLRAP1Q5SW96 308 aa17.02■□□□□ 0.32
ECHDC1-216ENST00000479525 KIAA1328Q86T90 577 aa17.02■□□□□ 0.32
ECHDC1-216ENST00000479525 RASGRP3Q8IV61 690 aa17.02■□□□□ 0.32
ECHDC1-216ENST00000479525 CDKL3Q8IVW4 592 aaPredicted RBP17.02■□□□□ 0.32
ECHDC1-216ENST00000479525 SPC24Q8NBT2 197 aa17.02■□□□□ 0.32
ECHDC1-216ENST00000479525 BRSK1Q8TDC3 778 aa17.02■□□□□ 0.32
ECHDC1-216ENST00000479525 PANX2Q96RD6 677 aa17.02■□□□□ 0.32
ECHDC1-216ENST00000479525 INSM2Q96T92 566 aaPredicted RBP17.02■□□□□ 0.32
ECHDC1-216ENST00000479525 R3HDM2Q9Y2K5 976 aaKnown RBP17.02■□□□□ 0.32
ECHDC1-216ENST00000479525 HEMK1Q9Y5R4 338 aaPredicted RBP17.02■□□□□ 0.32
ECHDC1-216ENST00000479525 SPTBP11277 2137 aa17.02■□□□□ 0.32
ECHDC1-216ENST00000479525 SRP72O76094 671 aaKnown RBP17.02■□□□□ 0.31
ECHDC1-216ENST00000479525 TPH1P17752 444 aa17.02■□□□□ 0.31
ECHDC1-216ENST00000479525 VCLP18206 1134 aa17.02■□□□□ 0.31
ECHDC1-216ENST00000479525 LPOP22079 712 aaPredicted RBP17.02■□□□□ 0.31
ECHDC1-216ENST00000479525 RWDD2BP57060 319 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms