RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 MKLN1Q9UL63 735 aa21■□□□□ 0.95
SDF4-206ENST00000478938 CFL2Q9Y281 166 aa21■□□□□ 0.95
SDF4-206ENST00000478938 TPRKBQ9Y3C4 175 aa21■□□□□ 0.95
SDF4-206ENST00000478938 LOC100506127A0A0U1RQW1 187 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 KCNK1O00180 336 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 ARHGEF9O43307 516 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 SNX4O95219 450 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 CST1P01037 141 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 HOXD8P13378 290 aaPredicted RBP20.99■□□□□ 0.95
SDF4-206ENST00000478938 STMN1P16949 149 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 CHRNB3Q05901 458 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 PTPN11Q06124 597 aaPredicted RBP20.99■□□□□ 0.95
SDF4-206ENST00000478938 MGAT3Q09327 533 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 CTBP1Q13363 440 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 PID1Q7Z2X4 250 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 GALNT5Q7Z7M9 940 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 TMEM179BQ7Z7N9 219 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 DTWD1Q8N5C7 304 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 LHFPL5Q8TAF8 219 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 DACT3Q96B18 629 aaPredicted RBP20.99■□□□□ 0.95
SDF4-206ENST00000478938 Q96MT0 163 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 RBM4BQ9BQ04 359 aaKnown RBP20.99■□□□□ 0.95
SDF4-206ENST00000478938 RBM4Q9BWF3 364 aaKnown RBP20.99■□□□□ 0.95
SDF4-206ENST00000478938 ELOVL4Q9GZR5 314 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 SLC52A3Q9NQ40 469 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.99■□□□□ 0.955e-10■■■■■ 26.9
SDF4-206ENST00000478938 UBIAD1Q9Y5Z9 338 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 FAM95CA0A1B0GW59 222 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 KCNQ2O43526 872 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 RGS10O43665 173 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 IPO13O94829 963 aaKnown RBP20.99■□□□□ 0.95
SDF4-206ENST00000478938 ZNF250P15622 560 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 MSH3P20585 1137 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 RYKP34925 604 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 RPS6KA2Q15349 733 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 NKG7Q16617 165 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 FAM98BQ52LJ0 330 aaKnown RBP20.99■□□□□ 0.95
SDF4-206ENST00000478938 SLC38A4Q969I6 547 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 TRNT1Q96Q11 434 aaKnown RBP20.99■□□□□ 0.95
SDF4-206ENST00000478938 FERD3LQ96RJ6 166 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 HDHD5Q9BXW7 423 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 LIN7BQ9HAP6 207 aa20.99■□□□□ 0.95
SDF4-206ENST00000478938 GNGT2O14610 69 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 PLA2G6O60733 806 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 TRAPPC2P0DI81 140 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 TRAPPC2BP0DI82 140 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 SLC12A2P55011 1212 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 FOXD4Q12950 439 aaPredicted RBP20.98■□□□□ 0.95
SDF4-206ENST00000478938 ARMC4Q5T2S8 1044 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 SLFN12LQ6IEE8 588 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 BLOC1S3Q6QNY0 202 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 ENPP6Q6UWR7 440 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 PROSER1Q86XN7 944 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 TP53INP2Q8IXH6 220 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 FLCNQ8NFG4 579 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 UBASH3BQ8TF42 649 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 FBLIM1Q8WUP2 373 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 TEX37Q96LM6 180 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 ZNF556Q9HAH1 456 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 E5RI56 91 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 K7ERI5 159 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 GRK5P34947 590 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 JAK3P52333 1124 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 EEFSECP57772 596 aaKnown RBP20.98■□□□□ 0.95
SDF4-206ENST00000478938 FAM160B2Q86V87 743 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 TRIM48Q8IWZ4 208 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 LINC00116Q8NCU8 138 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 MCPH1Q8NEM0 835 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 FBXO30Q8TB52 745 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 GSTO2Q9H4Y5 243 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 USE1Q9NZ43 259 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 ATPIF1Q9UII2 106 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 C3orf18Q9UK00 162 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 RNF6Q9Y252 685 aa20.98■□□□□ 0.95
SDF4-206ENST00000478938 TULP3O75386 442 aa20.97■□□□□ 0.95
SDF4-206ENST00000478938 CYP11A1P05108 521 aa20.97■□□□□ 0.95
SDF4-206ENST00000478938 HTR1EP28566 365 aa20.97■□□□□ 0.95
SDF4-206ENST00000478938 HNF4AP41235 474 aa20.97■□□□□ 0.95
SDF4-206ENST00000478938 TAS2R39P59534 338 aa20.97■□□□□ 0.95
SDF4-206ENST00000478938 SP4Q02446 784 aa20.97■□□□□ 0.95
SDF4-206ENST00000478938 SIM2Q14190 667 aaPredicted RBP20.97■□□□□ 0.95
SDF4-206ENST00000478938 ZNF267Q14586 743 aaPredicted RBP20.97■□□□□ 0.95
SDF4-206ENST00000478938 DPYSL2Q16555 572 aa20.97■□□□□ 0.95
SDF4-206ENST00000478938 TMEM65Q6PI78 240 aa20.97■□□□□ 0.95
SDF4-206ENST00000478938 ZNF767PQ75MW2 155 aa20.97■□□□□ 0.95
SDF4-206ENST00000478938 ZNF557Q8N988 423 aaPredicted RBP20.97■□□□□ 0.95
SDF4-206ENST00000478938 TMCO6Q96DC7 493 aa20.97■□□□□ 0.95
SDF4-206ENST00000478938 PDLIM7Q9NR12 457 aa20.97■□□□□ 0.95
SDF4-206ENST00000478938 SIPA1L1O43166 1804 aa20.97■□□□□ 0.95
SDF4-206ENST00000478938 JUNDP17535 347 aa20.97■□□□□ 0.95
SDF4-206ENST00000478938 ERP29P30040 261 aaKnown RBP20.97■□□□□ 0.95
SDF4-206ENST00000478938 DIO3P55073 304 aa20.97■□□□□ 0.95
SDF4-206ENST00000478938 SPATS1Q496A3 300 aa20.97■□□□□ 0.95
SDF4-206ENST00000478938 CCNJQ5T5M9 372 aa20.97■□□□□ 0.95
SDF4-206ENST00000478938 GALNT11Q8NCW6 608 aa20.97■□□□□ 0.95
SDF4-206ENST00000478938 SCN3BQ9NY72 215 aa20.97■□□□□ 0.95
SDF4-206ENST00000478938 PEX16Q9Y5Y5 336 aa20.97■□□□□ 0.95
SDF4-206ENST00000478938 A3GALT2U3KPV4 340 aa20.97■□□□□ 0.95
SDF4-206ENST00000478938 U3KQV3 271 aa20.97■□□□□ 0.95
SDF4-206ENST00000478938 NRCAMQ92823 1304 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms