RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 SPAG6O75602 509 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 SPAM1P38567 509 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 CDKN2BP42772 138 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 TNNT3P45378 269 aaPredicted RBP12.73□□□□□ -0.37
ABCF3-212ENST00000478288 CD97P48960 835 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 PMS2P54278 862 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 DRG2P55039 364 aaKnown RBP12.73□□□□□ -0.37
ABCF3-212ENST00000478288 WASHC5Q12768 1159 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 ITGA9Q13797 1035 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 TFDP2Q14188 446 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 ODF2Q5BJF6 829 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 ATP1A1-AS1Q5TC04 95 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 C16orf46Q6P387 395 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 KDELC1Q6UW63 502 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 RFX6Q8HWS3 928 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 APLFQ8IW19 511 aaPredicted RBP12.73□□□□□ -0.37
ABCF3-212ENST00000478288 CARFQ8N187 725 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 TTC30BQ8N4P2 665 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 TFB1MQ8WVM0 346 aaKnown RBP12.73□□□□□ -0.37
ABCF3-212ENST00000478288 ZFPM2Q8WW38 1151 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 ZNF514Q96K75 400 aaPredicted RBP12.73□□□□□ -0.37
ABCF3-212ENST00000478288 TTC25Q96NG3 672 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 LHX9Q9NQ69 397 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 ABHD10Q9NUJ1 306 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 IL17CQ9P0M4 197 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 ANKMY1Q9P2S6 941 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 LNPEPQ9UIQ6 1025 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 INTUQ9ULD6 942 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 TP53TG5Q9Y2B4 290 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 WDR37Q9Y2I8 494 aa12.73□□□□□ -0.37
ABCF3-212ENST00000478288 PSTPIP1O43586 416 aa12.72□□□□□ -0.37
ABCF3-212ENST00000478288 KIF1CO43896 1103 aaKnown RBP12.72□□□□□ -0.37
ABCF3-212ENST00000478288 CREG1O75629 220 aa12.72□□□□□ -0.37
ABCF3-212ENST00000478288 RFPL1O75677 317 aa12.72□□□□□ -0.37
ABCF3-212ENST00000478288 HLA-DPA1P20036 260 aa12.72□□□□□ -0.37
ABCF3-212ENST00000478288 CD68P34810 354 aaPredicted RBP12.72□□□□□ -0.37
ABCF3-212ENST00000478288 WNT3AP56704 352 aa12.72□□□□□ -0.37
ABCF3-212ENST00000478288 DYNLT1P63172 113 aa12.72□□□□□ -0.37
ABCF3-212ENST00000478288 ACY1Q03154 408 aa12.72□□□□□ -0.37
ABCF3-212ENST00000478288 TUBB3Q13509 450 aa12.72□□□□□ -0.37
ABCF3-212ENST00000478288 DNASE1L3Q13609 305 aa12.72□□□□□ -0.37
ABCF3-212ENST00000478288 IRGCQ6NXR0 463 aa12.72□□□□□ -0.37
ABCF3-212ENST00000478288 MFSD7Q6UXD7 560 aa12.72□□□□□ -0.37
ABCF3-212ENST00000478288 FAM92BQ6ZTR7 304 aa12.72□□□□□ -0.37
ABCF3-212ENST00000478288 GDAP1Q8TB36 358 aa12.72□□□□□ -0.37
ABCF3-212ENST00000478288 MIB2Q96AX9 1013 aa12.72□□□□□ -0.37
ABCF3-212ENST00000478288 CCDC42Q96M95 316 aa12.72□□□□□ -0.37
ABCF3-212ENST00000478288 FCRL5Q96RD9 977 aa12.72□□□□□ -0.37
ABCF3-212ENST00000478288 GPR87Q9BY21 358 aa12.72□□□□□ -0.37
ABCF3-212ENST00000478288 RARRES3Q9UL19 164 aa12.72□□□□□ -0.37
ABCF3-212ENST00000478288 DOPEY1Q5JWR5 2465 aa12.72□□□□□ -0.37
ABCF3-212ENST00000478288 SHANK1Q9Y566 2161 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 IGHV5-51A0A0C4DH38 117 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 GLYATL1P3A0A0U1RQE8 302 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 TLCD2A6NGC4 264 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 CBFA2T2O43439 604 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 POP7O75817 140 aaKnown RBP12.71□□□□□ -0.37
ABCF3-212ENST00000478288 NTRK1P04629 796 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 TPM1P09493 284 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 FURINP09958 794 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 PYGMP11217 842 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 HADHBP55084 474 aaKnown RBP12.71□□□□□ -0.37
ABCF3-212ENST00000478288 MPP3Q13368 585 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 ERV3-1Q14264 604 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 SLC1A5Q15758 541 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 RPE65Q16518 533 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 SIRPB2Q5JXA9 342 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 METRNLQ641Q3 311 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 GLT6D1Q7Z4J2 308 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 FAM26EQ8N5C1 309 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 BEND7Q8N7W2 519 aaPredicted RBP12.71□□□□□ -0.37
ABCF3-212ENST00000478288 RASGEF1AQ8N9B8 481 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 GPR150Q8NGU9 434 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 OR8K5Q8NH50 307 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 CT55Q8WUE5 264 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 THAP4Q8WY91 577 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 RNF25Q96BH1 459 aaPredicted RBP12.71□□□□□ -0.37
ABCF3-212ENST00000478288 MRGPRX2Q96LB1 330 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 NHEJ1Q9H9Q4 299 aaPredicted RBP12.71□□□□□ -0.37
ABCF3-212ENST00000478288 BPIFA1Q9NP55 256 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 UBP1Q9NZI7 540 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 PKP3Q9Y446 797 aa12.71□□□□□ -0.37
ABCF3-212ENST00000478288 GAPDHSO14556 408 aaPredicted RBP12.7□□□□□ -0.38
ABCF3-212ENST00000478288 SPOPO43791 374 aa12.7□□□□□ -0.38
ABCF3-212ENST00000478288 CST8O60676 142 aa12.7□□□□□ -0.38
ABCF3-212ENST00000478288 MFAP3LO75121 409 aa12.7□□□□□ -0.38
ABCF3-212ENST00000478288 TIAF1O95411 115 aa12.7□□□□□ -0.38
ABCF3-212ENST00000478288 MTHFD1P11586 935 aaKnown RBP12.7□□□□□ -0.38
ABCF3-212ENST00000478288 FOLR1P15328 257 aa12.7□□□□□ -0.38
ABCF3-212ENST00000478288 PECAM1P16284 738 aaPredicted RBP12.7□□□□□ -0.38
ABCF3-212ENST00000478288 NFKB1P19838 968 aa12.7□□□□□ -0.38
ABCF3-212ENST00000478288 COMTP21964 271 aa12.7□□□□□ -0.38
ABCF3-212ENST00000478288 CTSCP53634 463 aa12.7□□□□□ -0.38
ABCF3-212ENST00000478288 PPP1CAP62136 330 aa12.7□□□□□ -0.38
ABCF3-212ENST00000478288 TUBB4BP68371 445 aa12.7□□□□□ -0.38
ABCF3-212ENST00000478288 HSD11B2P80365 405 aa12.7□□□□□ -0.38
ABCF3-212ENST00000478288 SEMA5AQ13591 1074 aa12.7□□□□□ -0.38
ABCF3-212ENST00000478288 TUBB2AQ13885 445 aa12.7□□□□□ -0.38
ABCF3-212ENST00000478288 CHRNA6Q15825 494 aa12.7□□□□□ -0.38
ABCF3-212ENST00000478288 IGFBP7Q16270 282 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms