RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 SLC32A1Q9H598 525 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 CLMPQ9H6B4 373 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 PXMP2Q9NR77 195 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 TCP11L1Q9NUJ3 509 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 ERAP1Q9NZ08 941 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 ZNF580Q9UK33 172 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 MRPL11Q9Y3B7 192 aaKnown RBP4.76□□□□□ -1.65
VPS50-214ENST00000477935 AKAP13Q12802 2813 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 TEP1Q99973 2627 aaKnown RBP4.76□□□□□ -1.65
VPS50-214ENST00000477935 NOTCH4Q99466 2003 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 ABCB11O95342 1321 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 VWA3AA6NCI4 1184 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 C4orf47A7E2U8 309 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 CAPN9O14815 690 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 LDB2O43679 373 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 LIASO43766 372 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 IL1AP01583 271 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 CNPP09543 421 aaKnown RBP4.75□□□□□ -1.65
VPS50-214ENST00000477935 ENO3P13929 434 aaPredicted RBP4.75□□□□□ -1.65
VPS50-214ENST00000477935 HOXB6P17509 224 aaKnown RBP4.75□□□□□ -1.65
VPS50-214ENST00000477935 CD72P21854 359 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 YWHAQP27348 245 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 ZXDBP98169 803 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 WTAPQ15007 396 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 ANKRD1Q15327 319 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 ZNF284Q2VY69 593 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 FBXO43Q4G163 708 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 RUSC1-AS1Q66K80 236 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 NAPEPLDQ6IQ20 393 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 PDXDC1Q6P996 788 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 STOX1Q6ZVD7 989 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 AACSQ86V21 672 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 TMC8Q8IU68 726 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 GHDCQ8N2G8 530 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 SPEM1Q8N4L4 309 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 IQCF1Q8N6M8 205 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 ANKRD42Q8N9B4 389 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 ADAMTS15Q8TE58 950 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 TRIM63Q969Q1 353 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 TWNKQ96RR1 684 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 NACAP1Q9BZK3 213 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 PLEKHA4Q9H4M7 779 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 STN1Q9H668 368 aaKnown RBP4.75□□□□□ -1.65
VPS50-214ENST00000477935 TTC12Q9H892 705 aaPredicted RBP4.75□□□□□ -1.65
VPS50-214ENST00000477935 SUFUQ9UMX1 484 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 GPR52Q9Y2T5 361 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 NOTCH2Q04721 2471 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 TEX15Q9BXT5 2789 aa4.75□□□□□ -1.65
VPS50-214ENST00000477935 F5P12259 2224 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 CFAP46Q8IYW2 2715 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 ABCA12Q86UK0 2595 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 MYH7BA7E2Y1 1941 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 URB1O60287 2271 aaKnown RBP4.74□□□□□ -1.65
VPS50-214ENST00000477935 ANKRD17O75179 2603 aaKnown RBP4.74□□□□□ -1.65
VPS50-214ENST00000477935 TSPY2A6NKD2 308 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 GTPBP1O00178 669 aaKnown RBP4.74□□□□□ -1.65
VPS50-214ENST00000477935 KIF1CO43896 1103 aaKnown RBP4.74□□□□□ -1.65
VPS50-214ENST00000477935 AKAP3O75969 853 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 ADAP00813 363 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 TOP1P11387 765 aaKnown RBP4.74□□□□□ -1.65
VPS50-214ENST00000477935 CCND2P30279 289 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 TDO2P48775 406 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 PCYT1AP49585 367 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 EGR4Q05215 589 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 HNF4GQ14541 408 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 DHX8Q14562 1220 aaKnown RBP4.74□□□□□ -1.65
VPS50-214ENST00000477935 CCDC6Q16204 474 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 ME3Q16798 604 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 USH1GQ495M9 461 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 INO80DQ53TQ3 878 aaPredicted RBP4.74□□□□□ -1.65
VPS50-214ENST00000477935 HSP90AB4PQ58FF6 505 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 FSCBQ5H9T9 825 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 MARCH8Q5T0T0 291 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 GPATCH4Q5T3I0 446 aaKnown RBP4.74□□□□□ -1.65
VPS50-214ENST00000477935 KIAA1161Q6NSJ0 714 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 TPRG1Q6ZUI0 275 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 PALB2Q86YC2 1186 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 TEX45Q8NA69 505 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 OR4N2Q8NGD1 307 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 TMEM163Q8TC26 289 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 ELP5Q8TE02 316 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 DNASE1L2Q92874 299 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 NEUROG1Q92886 237 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 FGF14Q92915 247 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 IGSF21Q96ID5 467 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 RPP25Q9BUL9 199 aaKnown RBP4.74□□□□□ -1.65
VPS50-214ENST00000477935 LHPPQ9H008 270 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 NT5C3AQ9H0P0 336 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 FAM49AQ9H0Q0 323 aaPredicted RBP4.74□□□□□ -1.65
VPS50-214ENST00000477935 SMARCAD1Q9H4L7 1026 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 LMAN1LQ9HAT1 526 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 MRPL17Q9NRX2 175 aaKnown RBP4.74□□□□□ -1.65
VPS50-214ENST00000477935 PAG1Q9NWQ8 432 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 CDH7Q9ULB5 785 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 CLDN16Q9Y5I7 305 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 SRPRBQ9Y5M8 271 aaKnown RBP4.74□□□□□ -1.65
VPS50-214ENST00000477935 PLXNA4Q9HCM2 1894 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 CELSR3Q9NYQ7 3312 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 SDK1Q7Z5N4 2213 aa4.74□□□□□ -1.65
VPS50-214ENST00000477935 MYH8P13535 1937 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms