RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 KCNK5O95279 499 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 PGLSO95336 258 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 GH1P01241 217 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 ETS1P14921 441 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 ITGB8P26012 769 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 NMBRP28336 390 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 GABRA5P31644 462 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 SERPINB6P35237 376 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 TUBA4AP68366 448 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 KCNJ10P78508 379 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 HSF1Q00613 529 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 GALK2Q01415 458 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 PRKCEQ02156 737 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 SGCBQ16585 318 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 SOWAHAQ2M3V2 549 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 IQCCQ4KMZ1 466 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 ATP13A5Q4VNC0 1218 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 ALG10Q5BKT4 473 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 ALG10BQ5I7T1 473 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 LRRC73Q5JTD7 316 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 TEX35Q5T0J7 233 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 FCRLBQ6BAA4 426 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 SIGIRRQ6IA17 410 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 AAGABQ6PD74 315 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 ZCCHC12Q6PEW1 402 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 ZNF813Q6ZN06 617 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 PQLC2Q6ZP29 291 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 MARK2Q7KZI7 788 aaKnown RBP4.14□□□□□ -1.75
VPS13D-207ENST00000476169 CAMK1DQ8IU85 385 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 C9orf43Q8TAL5 461 aaPredicted RBP4.14□□□□□ -1.75
VPS13D-207ENST00000476169 KIAA1524Q8TCG1 905 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 OTULINQ96BN8 352 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 STAMBPL1Q96FJ0 436 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 OTUB1Q96FW1 271 aaPredicted RBP4.14□□□□□ -1.75
VPS13D-207ENST00000476169 EEF2KMTQ96G04 330 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 SMC6Q96SB8 1091 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 SEPHS2Q99611 448 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 NYXQ9GZU5 481 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 ZNF350Q9GZX5 532 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 LHPPQ9H008 270 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 TBC1D17Q9HA65 648 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 EQTNQ9NQ60 294 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 KLHL1Q9NR64 748 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 SEMA4GQ9NTN9 838 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 PRMT7Q9NVM4 692 aaPredicted RBP4.14□□□□□ -1.75
VPS13D-207ENST00000476169 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.14□□□□□ -1.75
VPS13D-207ENST00000476169 CISD1Q9NZ45 108 aaKnown RBP4.14□□□□□ -1.75
VPS13D-207ENST00000476169 SPG21Q9NZD8 308 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 HMG20BQ9P0W2 317 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 RABL2AQ9UBK7 228 aaPredicted RBP4.14□□□□□ -1.75
VPS13D-207ENST00000476169 SPASTQ9UBP0 616 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 OR14J1Q9UGF5 321 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 UTS2RQ9UKP6 389 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 RAP2CQ9Y3L5 183 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 HS3ST3A1Q9Y663 406 aa4.14□□□□□ -1.75
VPS13D-207ENST00000476169 A0A0U1RQF3 1178 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 C13orf42A0A1B0GVH6 325 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 A0A1W2PPM1 405 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 TMEM202A6NGA9 273 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 MAP2K7O14733 419 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 MEIS2O14770 477 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 RASGRF2O14827 1237 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 MATN3O15232 486 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 RNMTO43148 476 aaKnown RBP4.13□□□□□ -1.75
VPS13D-207ENST00000476169 RIPK2O43353 540 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 KLK8O60259 260 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 SELENOFO60613 162 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 UGDHO60701 494 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 MED24O75448 989 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 AKR7A3O95154 331 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 MT-ATP6P00846 226 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 WNT1P04628 370 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 SERPING1P05155 500 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 ABHD2P08910 425 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 CBSLP0DN79 551 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 CYP11B2P19099 503 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 BMP5P22003 454 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 AHCYP23526 432 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 ACAT1P24752 427 aaKnown RBP4.13□□□□□ -1.75
VPS13D-207ENST00000476169 CCND3P30281 292 aaPredicted RBP4.13□□□□□ -1.75
VPS13D-207ENST00000476169 CBSP35520 551 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 TMPRSS3P57727 454 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 ADORA2A-AS1P86434 159 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 LRRC74AQ0VAA2 488 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 SLC39A14Q15043 492 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 UGCGQ16739 394 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 C2orf68Q2NKX9 166 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 MAJINQ3KP22 176 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 AARDQ4LEZ3 155 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 KLHL26Q53HC5 615 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 SGO1Q5FBB7 561 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 EARS2Q5JPH6 523 aaKnown RBP4.13□□□□□ -1.75
VPS13D-207ENST00000476169 TTC39AQ5SRH9 613 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 PRAMEF8Q5VWM4 474 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 OLFML1Q6UWY5 402 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 MEX3BQ6ZN04 569 aaKnown RBP4.13□□□□□ -1.75
VPS13D-207ENST00000476169 RBM43Q6ZSC3 357 aaKnown RBP4.13□□□□□ -1.75
VPS13D-207ENST00000476169 LINGO2Q7L985 606 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 MRGPRGQ86SM5 289 aa4.13□□□□□ -1.75
VPS13D-207ENST00000476169 SERPINA11Q86U17 422 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms