RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 CD300LFQ8TDQ1 290 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 ELP5Q8TE02 316 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 PPP4R1Q8TF05 950 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 CASKIN2Q8WXE0 1202 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 ATOH1Q92858 354 aaPredicted RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 MAP4K1Q92918 833 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 ATG4CQ96DT6 458 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 TSPAN17Q96FV3 270 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 DUS3LQ96G46 650 aaKnown RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 BOD1Q96IK1 185 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 FAM84BQ96KN1 310 aaPredicted RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 CASD1Q96PB1 797 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 ZNF347Q96SE7 839 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 SLC9A7Q96T83 725 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 PHOX2BQ99453 314 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 DOK1Q99704 481 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 PRRX2Q99811 253 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 VRK1Q99986 396 aaPredicted RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 FAM118BQ9BPY3 351 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 MAPKAP1Q9BPZ7 522 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 OCSTAMPQ9BR26 566 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 BTBD1Q9H0C5 482 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.82□□□□□ -1.8
LSM2-211ENST00000475835 UPF3AQ9H1J1 476 aaKnown RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 GANQ9H2C0 597 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 OR52A5Q9H2C5 316 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 ARMC7Q9H6L4 198 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 RANBP3Q9H6Z4 567 aaPredicted RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 RSAD1Q9HA92 442 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 HMG20AQ9NP66 347 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 ADAP2Q9NPF8 381 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 XPNPEP1Q9NQW7 623 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 SAR1AQ9NR31 198 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 CCM2LQ9NUG4 571 aaPredicted RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 ACOXLQ9NUZ1 547 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 RNF19AQ9NV58 838 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 PRMT7Q9NVM4 692 aaPredicted RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 RIC8BQ9NVN3 520 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.82□□□□□ -1.8
LSM2-211ENST00000475835 RBAKQ9NYW8 714 aaPredicted RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 ACTR10Q9NZ32 417 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 COQ3Q9NZJ6 369 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 NDRG3Q9UGV2 375 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 BCAP29Q9UHQ4 241 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 ZMYM5Q9UJ78 669 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 MGAT4AQ9UM21 535 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 ADAMTS5Q9UNA0 930 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 CLCA2Q9UQC9 943 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 LIPT1Q9Y234 373 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 NCKAP1Q9Y2A7 1128 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 MAP3K2Q9Y2U5 619 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 MTO1Q9Y2Z2 717 aaKnown RBP3.82□□□□□ -1.8
LSM2-211ENST00000475835 PTPRFP10586 1907 aa3.82□□□□□ -1.8
LSM2-211ENST00000475835 TJP1Q07157 1748 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 NUP188Q5SRE5 1749 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 PXDNQ92626 1479 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 PFASO15067 1338 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 POTEMA6NI47 508 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 DRGXA6NNA5 263 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 CENPXA8MT69 81 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 KCNU1A8MYU2 1149 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 LEUTXA8MZ59 168 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 ARVCFO00192 962 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 CYR61O00622 381 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 SH2B2O14492 632 aaPredicted RBP3.81□□□□□ -1.8
LSM2-211ENST00000475835 GABRDO14764 452 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 BACH1O14867 736 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 PLD2O14939 933 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 ADAMDEC1O15204 470 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 EIF3DO15371 548 aaKnown RBP eCLIP3.81□□□□□ -1.8
LSM2-211ENST00000475835 PSMD3O43242 534 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 SPINT1O43278 529 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 ARHGEF9O43307 516 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 HTRA2O43464 458 aaPredicted RBP3.81□□□□□ -1.8
LSM2-211ENST00000475835 PRKYO43930 277 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 SNAP91O60641 907 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 DPM1O60762 260 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 TRIM13O60858 407 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 DTNBO60941 627 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 CLPXO76031 633 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 OR6B1O95007 311 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 PTTG1O95997 202 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 ANXA1P04083 346 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 IFNA6P05013 189 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 SERPINA6P08185 405 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 ADRB1P08588 477 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 GSTP1P09211 210 aaKnown RBP3.81□□□□□ -1.8
LSM2-211ENST00000475835 RNF224P0DH78 156 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 THRAP10827 490 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 SLC2A4P14672 509 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 CD36P16671 472 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 SPI1P17947 270 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 XRCC1P18887 633 aaPredicted RBP3.81□□□□□ -1.8
LSM2-211ENST00000475835 DDCP20711 480 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 HNF1AP20823 631 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 ZP3P21754 424 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 LPOP22079 712 aaPredicted RBP3.81□□□□□ -1.8
LSM2-211ENST00000475835 TGM1P22735 817 aa3.81□□□□□ -1.8
LSM2-211ENST00000475835 PROZP22891 400 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms