RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 ABHD18Q0P651 414 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 CDC20Q12834 499 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 KCNAB2Q13303 367 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 TFDP2Q14188 446 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 NFE2L1Q14494 772 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 KCNAB1Q14722 419 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 RPE65Q16518 533 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 SKIDA1Q1XH10 827 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 COLEC12Q5KU26 742 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 GPRC6AQ5T6X5 926 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 METRNLQ641Q3 311 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 DENND5AQ6IQ26 1287 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 CCDC70Q6NSX1 233 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 AADACL2Q6P093 401 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 ATG14Q6ZNE5 492 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 BZW1Q7L1Q6 419 aaKnown RBP6.88□□□□□ -1.31
HDAC3-207ENST00000475549 PRSS42Q7Z5A4 293 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 TMEM135Q86UB9 458 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 TRAPPC5Q8IUR0 188 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 CNGA4Q8IV77 575 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 LILRA3Q8N6C8 439 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-207ENST00000475549 GALNT6Q8NCL4 622 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 DDHD1Q8NEL9 900 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 IPMKQ8NFU5 416 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 BRSK1Q8TDC3 778 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 BLOC1S5Q8TDH9 187 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 STARD8Q92502 1023 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 ABHD17AQ96GS6 310 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 PPM1MQ96MI6 270 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 QKIQ96PU8 341 aaKnown RBP eCLIP6.88□□□□□ -1.31
HDAC3-207ENST00000475549 SRPK1Q96SB4 655 aaKnown RBP6.88□□□□□ -1.31
HDAC3-207ENST00000475549 RUFY1Q96T51 708 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 INSM2Q96T92 566 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-207ENST00000475549 VAT1Q99536 393 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 FAM118BQ9BPY3 351 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 ULBP3Q9BZM4 244 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 RAB33BQ9H082 229 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 ZMYND15Q9H091 742 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 ADNPQ9H2P0 1102 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 TSPY26PQ9H489 355 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 TRABDQ9H4I3 376 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 STN1Q9H668 368 aaKnown RBP6.88□□□□□ -1.31
HDAC3-207ENST00000475549 ZNF71Q9NQZ8 489 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-207ENST00000475549 POT1Q9NUX5 634 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 SMOXQ9NWM0 555 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 SEMA5BQ9P283 1151 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 KLHL8Q9P2G9 620 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-207ENST00000475549 EPHA6Q9UF33 1036 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 PSMD13Q9UNM6 376 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 REXO2Q9Y3B8 237 aaKnown RBP6.88□□□□□ -1.31
HDAC3-207ENST00000475549 CFAP20Q9Y6A4 193 aaKnown RBP6.88□□□□□ -1.31
HDAC3-207ENST00000475549 RPS6KL1Q9Y6S9 549 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 SPTA1P02549 2419 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 SDK2Q58EX2 2172 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 GLYATL1P3A0A0U1RQE8 302 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 AGAP14A8MT82 685 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 MTSS1O43312 755 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 PPFIA2O75334 1257 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 SPAG6O75602 509 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 KIAA0754O94854 1291 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 HLA-DPA1P20036 260 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 SPAM1P38567 509 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 TLE1Q04724 770 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 MPP3Q13368 585 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 XRCC4Q13426 336 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 LAMB3Q13751 1172 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 MAP7Q14244 749 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 IL11RAQ14626 422 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 IGFBP7Q16270 282 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 PPP2R5EQ16537 467 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 SKOR2Q2VWA4 1001 aaPredicted RBP6.87□□□□□ -1.31
HDAC3-207ENST00000475549 DEFB109BQ30KR1 87 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 ZNF658BQ4V348 819 aaPredicted RBP6.87□□□□□ -1.31
HDAC3-207ENST00000475549 CRTC2Q53ET0 693 aaPredicted RBP6.87□□□□□ -1.31
HDAC3-207ENST00000475549 LDLRAP1Q5SW96 308 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 FNBP1LQ5T0N5 605 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 PRAMEF17Q5VTA0 474 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 CACHD1Q5VU97 1274 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 PWWP2BQ6NUJ5 590 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 C11orf63Q6NUN7 778 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 IRGCQ6NXR0 463 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 C16orf46Q6P387 395 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 SARM1Q6SZW1 724 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 C6orf15Q6UXA7 325 aaPredicted RBP6.87□□□□□ -1.31
HDAC3-207ENST00000475549 BBS12Q6ZW61 710 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 DET1Q7L5Y6 550 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 GLT6D1Q7Z4J2 308 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 AMZ2Q86W34 360 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 TRIM48Q8IWZ4 208 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 ESX1Q8N693 406 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 AVL9Q8NBF6 648 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 SLC38A9Q8NBW4 561 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 OR13C4Q8NGS5 318 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 GDAP1Q8TB36 358 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 ACTL9Q8TC94 416 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 ZNF398Q8TD17 642 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 ALG3Q92685 438 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 SLC41A2Q96JW4 573 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 MAP3K3Q99759 626 aa6.87□□□□□ -1.31
HDAC3-207ENST00000475549 APOL2Q9BQE5 337 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms