RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 SCML1Q9UN30 329 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 PCDHGB6Q9Y5F9 930 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 CPAMD8Q8IZJ3 1885 aa4.06□□□□□ -1.76
USP16-205ENST00000474835 A0A1W2PP18 115 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 PRMT5O14744 637 aaPredicted RBP4.05□□□□□ -1.76
USP16-205ENST00000474835 TPOP07202 933 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 SNRPB2P08579 225 aaKnown RBP4.05□□□□□ -1.76
USP16-205ENST00000474835 RBP1P09455 135 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 CBLP22681 906 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 NR4A1P22736 598 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 IL32P24001 234 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 PAX6P26367 422 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 GNA15P30679 374 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 ICAM3P32942 547 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 APLP1P51693 650 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 ROR1Q01973 937 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 NFIAQ12857 509 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 ZBTB6Q15916 424 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 SEZ6Q53EL9 994 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 GPAT3Q53EU6 434 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 UNC50Q53HI1 259 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 NHLRC3Q5JS37 347 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 INTS6LQ5JSJ4 861 aaKnown RBP4.05□□□□□ -1.76
USP16-205ENST00000474835 DCAF15Q66K64 600 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 ZNF770Q6IQ21 691 aaPredicted RBP4.05□□□□□ -1.76
USP16-205ENST00000474835 LRRC8EQ6NSJ5 796 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 ZNF544Q6NX49 715 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 KDELC2Q7Z4H8 507 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 PROSER1Q86XN7 944 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 NKAIN4Q8IVV8 208 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 DEPDC4Q8N2C3 294 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 DCBLD1Q8N8Z6 715 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 ANKRD53Q8N9V6 530 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 FNDC5Q8NAU1 212 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 ARRDC4Q8NCT1 418 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 BIRC7Q96CA5 298 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 INTS12Q96CB8 462 aaKnown RBP4.05□□□□□ -1.76
USP16-205ENST00000474835 C19orf60Q96EN9 201 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 SLC10A4Q96EP9 437 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 CEP19Q96LK0 163 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 RSPO3Q9BXY4 272 aaPredicted RBP4.05□□□□□ -1.76
USP16-205ENST00000474835 RNF38Q9H0F5 515 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 TOR3AQ9H497 397 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 PRDM12Q9H4Q4 367 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 FZD10Q9ULW2 581 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 USP18Q9UMW8 372 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 FAF1Q9UNN5 650 aaPredicted RBP4.05□□□□□ -1.76
USP16-205ENST00000474835 FKBP7Q9Y680 259 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 WDFY3Q8IZQ1 3526 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 SPEGQ15772 3267 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 GAS2O43903 313 aaKnown RBP4.05□□□□□ -1.76
USP16-205ENST00000474835 GPX5O75715 221 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 CLIC3O95833 236 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 TP53P04637 393 aaPredicted RBP4.05□□□□□ -1.76
USP16-205ENST00000474835 INHBAP08476 426 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 HDCP19113 662 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 CPN2P22792 545 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 GSK3BP49841 420 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 CYP2J2P51589 502 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 SLC7A2P52569 658 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 AGFG1P52594 562 aaKnown RBP4.05□□□□□ -1.76
USP16-205ENST00000474835 EPHB1P54762 984 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 CLDN20P56880 219 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 STX1BP61266 288 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 RPS8P62241 208 aaKnown RBP4.05□□□□□ -1.76
USP16-205ENST00000474835 EN1Q05925 392 aaPredicted RBP4.05□□□□□ -1.76
USP16-205ENST00000474835 EPS8Q12929 822 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 TRAF2Q12933 501 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 STARD3Q14849 445 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 MAD2L1BPQ15013 274 aaPredicted RBP4.05□□□□□ -1.76
USP16-205ENST00000474835 TEAD4Q15561 434 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 MINDY4Q4G0A6 757 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 XKR4Q5GH76 650 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 ODR4Q5SWX8 454 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 ALG1LQ6GMV1 187 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 ZBTB49Q6ZSB9 765 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 PIWIL4Q7Z3Z4 852 aaKnown RBP4.05□□□□□ -1.76
USP16-205ENST00000474835 ZFAND4Q86XD8 727 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 DDIASQ8IXT1 998 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 C10orf111Q8N326 155 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 FSTL5Q8N475 847 aaPredicted RBP4.05□□□□□ -1.76
USP16-205ENST00000474835 MYCT1Q8N699 235 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 FAM86B1Q8N7N1 296 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 UXS1Q8NBZ7 420 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 NLGN4YQ8NFZ3 816 aaPredicted RBP4.05□□□□□ -1.76
USP16-205ENST00000474835 RADILQ96JH8 1075 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 HRASLS5Q96KN8 279 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 VPS35Q96QK1 796 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 UIMC1Q96RL1 719 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 DCLRE1CQ96SD1 692 aaKnown RBP4.05□□□□□ -1.76
USP16-205ENST00000474835 DCUN1D5Q9BTE7 237 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 TRMOQ9BU70 441 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 SLC25A23Q9BV35 468 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 ACE2Q9BYF1 805 aaPredicted RBP4.05□□□□□ -1.76
USP16-205ENST00000474835 CPEB1Q9BZB8 566 aaKnown RBP4.05□□□□□ -1.76
USP16-205ENST00000474835 ILKAPQ9H0C8 392 aaPredicted RBP4.05□□□□□ -1.76
USP16-205ENST00000474835 DUSP15Q9H1R2 295 aaPredicted RBP4.05□□□□□ -1.76
USP16-205ENST00000474835 CAAP1Q9H8G2 361 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 NMRAL1Q9HBL8 299 aa4.05□□□□□ -1.76
USP16-205ENST00000474835 HPS4Q9NQG7 708 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms