RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-208ENST00000474319 PCDHB7Q9Y5E2 793 aa10.62□□□□□ -0.71
LSS-208ENST00000474319 OAS3Q9Y6K5 1087 aaKnown RBP10.62□□□□□ -0.71
LSS-208ENST00000474319 SLC22A2O15244 555 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 ZSCAN9O15535 394 aaPredicted RBP10.61□□□□□ -0.71
LSS-208ENST00000474319 MITFO75030 526 aaPredicted RBP10.61□□□□□ -0.71
LSS-208ENST00000474319 FUCA1P04066 466 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 RFC2P35250 354 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 PIGAP37287 484 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 HSPA7P48741 367 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 RAD51Q06609 339 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 LCP2Q13094 533 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 PGS1Q32NB8 556 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 DCP1BQ8IZD4 617 aaKnown RBP10.61□□□□□ -0.71
LSS-208ENST00000474319 DTWD1Q8N5C7 304 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 KRTCAP2Q8N6L1 136 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 ST13P5Q8NFI4 369 aaPredicted RBP10.61□□□□□ -0.71
LSS-208ENST00000474319 CNIH3Q8TBE1 160 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 PNPT1Q8TCS8 783 aaKnown RBP10.61□□□□□ -0.71
LSS-208ENST00000474319 MYRFLQ96LU7 910 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 TM6SF2Q9BZW4 377 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 HIPK3Q9H422 1215 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 TOR3AQ9H497 397 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 COQ6Q9Y2Z9 468 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 AP3B1O00203 1094 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 ACOX3O15254 700 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 CCNA2P20248 432 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 FMO3P31513 532 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 FAM189BP81408 668 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 IL5RAQ01344 420 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 TAF10Q12962 218 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 CBLBQ13191 982 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 LRRC8DQ7L1W4 858 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 KLHL23Q8NBE8 558 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 AUTS2Q8WXX7 1259 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 CDKN2AIPNLQ96HQ2 116 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 CARS2Q9HA77 564 aaKnown RBP10.61□□□□□ -0.71
LSS-208ENST00000474319 AMBNQ9NP70 447 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 RASSF1Q9NS23 344 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 MARCH2Q9P0N8 246 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 ACTR3BQ9P1U1 418 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 ZNF225Q9UK10 706 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 ANGPTL3Q9Y5C1 460 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 SLC30A1Q9Y6M5 507 aa10.61□□□□□ -0.71
LSS-208ENST00000474319 INMTO95050 263 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 ZNF682O95780 498 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 CST1P01037 141 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 FTH1P02794 183 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 HRH2P25021 359 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 GKP32189 559 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 ATP6V0D1P61421 351 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 MBTPS1Q14703 1052 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 ARHGEF6Q15052 776 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 SLC36A3Q495N2 470 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 TMTC4Q5T4D3 741 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 BLOC1S3Q6QNY0 202 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 TMEM86AQ8N2M4 240 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 TNIP2Q8NFZ5 429 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 STAG3L4Q8TBR4 150 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 TBC1D15Q8TC07 691 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 ITFG2Q969R8 447 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 SEZ6LQ9BYH1 1024 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 ITM2CQ9NQX7 267 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 TMEM39AQ9NV64 488 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 TAS2R13Q9NYV9 303 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 DAPK2Q9UIK4 370 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 TRMT6Q9UJA5 497 aaKnown RBP10.6□□□□□ -0.71
LSS-208ENST00000474319 SYCE1LA8MT33 242 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 FGF10O15520 208 aaPredicted RBP10.6□□□□□ -0.71
LSS-208ENST00000474319 C1QCP02747 245 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 MYCLP1P12525 358 aaPredicted RBP10.6□□□□□ -0.71
LSS-208ENST00000474319 CCL5P13501 91 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 AXLP30530 894 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 EIF2B2P49770 351 aaKnown RBP10.6□□□□□ -0.71
LSS-208ENST00000474319 AIF1P55008 147 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 RPL26P61254 145 aaKnown RBP10.6□□□□□ -0.71
LSS-208ENST00000474319 TIAL1Q01085 375 aaKnown RBP eCLIP10.6□□□□□ -0.71
LSS-208ENST00000474319 CHRNB3Q05901 458 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 MADCAM1Q13477 382 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 ATP6AP1Q15904 470 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 TRIM60Q495X7 471 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 RFTN2Q52LD8 501 aaPredicted RBP10.6□□□□□ -0.71
LSS-208ENST00000474319 TMEM236Q5W0B7 351 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 LETMD1Q6P1Q0 360 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 GPSM1Q86YR5 675 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 RSPH1Q8WYR4 309 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 SNX19Q92543 992 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 DPF3Q92784 378 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 TSGA13Q96PP4 275 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 HOPXQ9BPY8 73 aaPredicted RBP10.6□□□□□ -0.71
LSS-208ENST00000474319 FEM1AQ9BSK4 669 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 SH3PXD2BA1X283 911 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 ATXN1LP0C7T5 689 aaKnown RBP10.6□□□□□ -0.71
LSS-208ENST00000474319 IDO1P14902 403 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 MYF6P23409 242 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 MC4RP32245 332 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 MAP2K4P45985 399 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 CSRP3P50461 194 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 DGKEP52429 567 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 VAC14Q08AM6 782 aa10.6□□□□□ -0.71
LSS-208ENST00000474319 AP5B1Q2VPB7 878 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms