RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 HADHAP40939 763 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 LMAN1P49257 510 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 SNRPEP62304 92 aaKnown RBP3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 SIRPAP78324 504 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 COG7P83436 770 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 LMOD3Q0VAK6 560 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 KRT33BQ14525 404 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 NR1D2Q14995 579 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 SIRPB2Q5JXA9 342 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 FAM205BPQ63HN1 556 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 DHRS7BQ6IAN0 325 aaPredicted RBP3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 KIAA0930Q6ICG6 404 aaPredicted RBP3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 FBXL22Q6P050 247 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 FAM171BQ6P995 826 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 C19orf48Q6RUI8 117 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 ZNF534Q76KX8 674 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 CTAGE4Q8IX94 777 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 GPALPP1Q8IXQ4 340 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 CNBD1Q8NA66 436 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 PAPD5Q8NDF8 572 aaKnown RBP3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 SPATA20Q8TB22 786 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 SLC44A1Q8WWI5 657 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 LINGO1Q96FE5 620 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 LMLNQ96KR4 655 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 KIFC3Q9BVG8 833 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 MOV10L1Q9BXT6 1211 aaKnown RBP3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 CSTL1Q9H114 145 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 GHITMQ9H3K2 345 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 DENND2DQ9H6A0 471 aaPredicted RBP3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 DNAJC18Q9H819 358 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 ZNF334Q9HCZ1 680 aaPredicted RBP3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 GIMAP4Q9NUV9 329 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 STK26Q9P289 416 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 GPR34Q9UPC5 381 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 NME7Q9Y5B8 376 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 NOTCH3Q9UM47 2321 aa3.14□□□□□ -1.91
ECHDC1-213ENST00000474240 A0A0G2JNG1 304 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 A0A1W2PPI3 338 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 TMEM178BH3BS89 294 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 BMP10O95393 424 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 CAVIN2O95810 425 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 H1F0P07305 194 aaKnown RBP3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 PRSS1P07477 247 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 INHBAP08476 426 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 PRLRP16471 622 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 HRH2P25021 359 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 ARCN1P48444 511 aaKnown RBP3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 ISL1P61371 349 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 CXCL9Q07325 125 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 KIR2DS3Q14952 304 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 KIR2DS5Q14953 304 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 DUOXA1Q1HG43 343 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 FAM76BQ5HYJ3 339 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 ZNF852Q6ZMS4 543 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 INTS8Q75QN2 995 aaKnown RBP3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 DSG4Q86SJ6 1040 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 SLC9B2Q86UD5 537 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 GALNT13Q8IUC8 556 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 FOXP4Q8IVH2 680 aaPredicted RBP3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 POC5Q8NA72 575 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 OR52I2Q8NH67 350 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 DNASE2BQ8WZ79 361 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 NR4A3Q92570 626 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 MTERF3Q96E29 417 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 GAD1Q99259 594 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 DDOQ99489 341 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 BARD1Q99728 777 aaKnown RBP3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 SLX1AQ9BQ83 275 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 MMP27Q9H306 513 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 UPF2Q9HAU5 1272 aaKnown RBP3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 ZBTB20Q9HC78 741 aaPredicted RBP3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 CHMP1AQ9HD42 196 aaPredicted RBP3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 ARHGEF38Q9NXL2 777 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 PNMA2Q9UL42 364 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 ZNF148Q9UQR1 794 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 GRIP1Q9Y3R0 1128 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 SNX8Q9Y5X2 465 aa3.13□□□□□ -1.91
ECHDC1-213ENST00000474240 PRAG1Q86YV5 1406 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 MED19A0JLT2 244 aaPredicted RBP3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 LNP1A1A4G5 178 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 OR2M5A3KFT3 312 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 J3QR06 171 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 CTDSP2O14595 271 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 PRKNO60260 465 aaPredicted RBP3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 GPR137BO60478 399 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 LMX1BO60663 402 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 PRAMEF11O60813 436 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 AVILO75366 819 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 IGKV3-20P01619 116 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 TFAP2AP05549 437 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 TPOP07202 933 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 GJA1P17302 382 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 GCH1P30793 250 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 SNX16P57768 344 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 HILS1P60008 231 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 RPL24P83731 157 aaKnown RBP3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 SPOCK1Q08629 439 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 ARL16Q0P5N6 197 aa3.12□□□□□ -1.91
ECHDC1-213ENST00000474240 DMP1Q13316 513 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms