RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 CASS4Q9NQ75 786 aa19.89■□□□□ 0.77
APP-215ENST00000474136 RRAGDQ9NQL2 400 aaPredicted RBP19.89■□□□□ 0.77
APP-215ENST00000474136 SLC30A1Q9Y6M5 507 aa19.89■□□□□ 0.77
APP-215ENST00000474136 TNRC6AQ8NDV7 1962 aaKnown RBP19.88■□□□□ 0.77
APP-215ENST00000474136 KIR2DS5A0A0G2JLQ3 304 aa19.88■□□□□ 0.77
APP-215ENST00000474136 A0A0G2JNG1 304 aa19.88■□□□□ 0.77
APP-215ENST00000474136 LILRA5A6NI73 299 aa19.88■□□□□ 0.77
APP-215ENST00000474136 KIR2DS3K7RE56 304 aa19.88■□□□□ 0.77
APP-215ENST00000474136 IL4RP24394 825 aa19.88■□□□□ 0.77
APP-215ENST00000474136 STC1P52823 247 aa19.88■□□□□ 0.77
APP-215ENST00000474136 UBE2IP63279 158 aaKnown RBP19.88■□□□□ 0.77
APP-215ENST00000474136 CHAF1BQ13112 559 aa19.88■□□□□ 0.77
APP-215ENST00000474136 KIR2DS5Q14953 304 aa19.88■□□□□ 0.77
APP-215ENST00000474136 EIF2S3LQ2VIR3 472 aaKnown RBP19.88■□□□□ 0.77
APP-215ENST00000474136 PRR30Q53SZ7 412 aaPredicted RBP19.88■□□□□ 0.77
APP-215ENST00000474136 CPZQ66K79 652 aa19.88■□□□□ 0.77
APP-215ENST00000474136 BBS12Q6ZW61 710 aa19.88■□□□□ 0.77
APP-215ENST00000474136 ZNF572Q7Z3I7 529 aaPredicted RBP19.88■□□□□ 0.77
APP-215ENST00000474136 RFX6Q8HWS3 928 aa19.88■□□□□ 0.77
APP-215ENST00000474136 CSPG4P5Q96PW8 444 aa19.88■□□□□ 0.77
APP-215ENST00000474136 PLEKHG4BQ96PX9 1271 aa19.88■□□□□ 0.77
APP-215ENST00000474136 CUEDC1Q9NWM3 386 aaPredicted RBP19.88■□□□□ 0.77
APP-215ENST00000474136 SCHIP1Q9P0W5 487 aaPredicted RBP19.88■□□□□ 0.77
APP-215ENST00000474136 VPS18Q9P253 973 aa19.88■□□□□ 0.77
APP-215ENST00000474136 PCDHGA6Q9Y5G7 932 aa19.88■□□□□ 0.77
APP-215ENST00000474136 SHANK1Q9Y566 2161 aa19.87■□□□□ 0.77
APP-215ENST00000474136 CCDC188H7C350 402 aa19.87■□□□□ 0.77
APP-215ENST00000474136 APOL1O14791 398 aa19.87■□□□□ 0.77
APP-215ENST00000474136 KIF1CO43896 1103 aaKnown RBP19.87■□□□□ 0.77
APP-215ENST00000474136 FZD6O60353 706 aa19.87■□□□□ 0.77
APP-215ENST00000474136 SPAG6O75602 509 aa19.87■□□□□ 0.77
APP-215ENST00000474136 TIAF1O95411 115 aa19.87■□□□□ 0.77
APP-215ENST00000474136 PYGLP06737 847 aa19.87■□□□□ 0.77
APP-215ENST00000474136 CD48P09326 243 aa19.87■□□□□ 0.77
APP-215ENST00000474136 AMPD1P23109 780 aa19.87■□□□□ 0.77
APP-215ENST00000474136 MMP13P45452 471 aa19.87■□□□□ 0.77
APP-215ENST00000474136 NR2C2P49116 596 aa19.87■□□□□ 0.77
APP-215ENST00000474136 MRPL49Q13405 166 aaKnown RBP19.87■□□□□ 0.77
APP-215ENST00000474136 IHHQ14623 411 aa19.87■□□□□ 0.77
APP-215ENST00000474136 KAZNQ674X7 775 aa19.87■□□□□ 0.77
APP-215ENST00000474136 MS4A14Q96JA4 679 aa19.87■□□□□ 0.77
APP-215ENST00000474136 ZNF768Q9H5H4 540 aaKnown RBP19.87■□□□□ 0.77
APP-215ENST00000474136 PADI1Q9ULC6 663 aa19.87■□□□□ 0.77
APP-215ENST00000474136 A0A0J9YYE9 177 aa19.86■□□□□ 0.77
APP-215ENST00000474136 FADS2P1A8MWK0 482 aa19.86■□□□□ 0.77
APP-215ENST00000474136 CST8O60676 142 aa19.86■□□□□ 0.77
APP-215ENST00000474136 ZNF189O75820 626 aaPredicted RBP19.86■□□□□ 0.77
APP-215ENST00000474136 SORBS2O94875 1100 aaKnown RBP19.86■□□□□ 0.77
APP-215ENST00000474136 UBXN7O94888 489 aa19.86■□□□□ 0.77
APP-215ENST00000474136 TRBC1P01850 177 aa19.86■□□□□ 0.77
APP-215ENST00000474136 CCNYL3P0C7X3 344 aa19.86■□□□□ 0.77
APP-215ENST00000474136 SLC2A4P14672 509 aa19.86■□□□□ 0.77
APP-215ENST00000474136 ZNF30P17039 623 aa19.86■□□□□ 0.77
APP-215ENST00000474136 DCTP40126 519 aa19.86■□□□□ 0.77
APP-215ENST00000474136 GARSP41250 739 aaKnown RBP19.86■□□□□ 0.77
APP-215ENST00000474136 IL11RAQ14626 422 aa19.86■□□□□ 0.77
APP-215ENST00000474136 RALGPS1Q5JS13 557 aa19.86■□□□□ 0.77
APP-215ENST00000474136 SLC9A4Q6AI14 798 aa19.86■□□□□ 0.77
APP-215ENST00000474136 BBS5Q8N3I7 341 aa19.86■□□□□ 0.77
APP-215ENST00000474136 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.86■□□□□ 0.77
APP-215ENST00000474136 HEMGNQ9BXL5 484 aa19.86■□□□□ 0.77
APP-215ENST00000474136 ACTL8Q9H568 366 aa19.86■□□□□ 0.77
APP-215ENST00000474136 AKIRIN1Q9H9L7 192 aaPredicted RBP19.86■□□□□ 0.77
APP-215ENST00000474136 NT5MQ9NPB1 228 aa19.86■□□□□ 0.77
APP-215ENST00000474136 LHX9Q9NQ69 397 aa19.86■□□□□ 0.77
APP-215ENST00000474136 LUZP4Q9P127 313 aa19.86■□□□□ 0.77
APP-215ENST00000474136 CELSR2Q9HCU4 2923 aa19.85■□□□□ 0.77
APP-215ENST00000474136 CTAGE15A4D2H0 777 aa19.85■□□□□ 0.77
APP-215ENST00000474136 APOC4-APOC2K7ER74 178 aa19.85■□□□□ 0.77
APP-215ENST00000474136 RASSF9O75901 435 aa19.85■□□□□ 0.77
APP-215ENST00000474136 CLDN7O95471 211 aa19.85■□□□□ 0.77
APP-215ENST00000474136 CLDN1O95832 211 aa19.85■□□□□ 0.77
APP-215ENST00000474136 APOC2P02655 101 aa19.85■□□□□ 0.77
APP-215ENST00000474136 CTAGE8P0CG41 777 aa19.85■□□□□ 0.77
APP-215ENST00000474136 FGF5P12034 268 aa19.85■□□□□ 0.77
APP-215ENST00000474136 SERPINB6P35237 376 aa19.85■□□□□ 0.77
APP-215ENST00000474136 PGDP52209 483 aa19.85■□□□□ 0.77
APP-215ENST00000474136 RPS18P62269 152 aaKnown RBP19.85■□□□□ 0.77
APP-215ENST00000474136 MMRN1Q13201 1228 aa19.85■□□□□ 0.77
APP-215ENST00000474136 KLF1Q13351 362 aaPredicted RBP19.85■□□□□ 0.77
APP-215ENST00000474136 INPP5JQ15735 1006 aaPredicted RBP19.85■□□□□ 0.77
APP-215ENST00000474136 MARC1Q5VT66 337 aa19.85■□□□□ 0.77
APP-215ENST00000474136 TMCO3Q6UWJ1 677 aa19.85■□□□□ 0.77
APP-215ENST00000474136 TMEM26Q6ZUK4 368 aa19.85■□□□□ 0.77
APP-215ENST00000474136 CTAGE6Q86UF2 777 aa19.85■□□□□ 0.77
APP-215ENST00000474136 CTAGE4Q8IX94 777 aa19.85■□□□□ 0.77
APP-215ENST00000474136 ATPAF2Q8N5M1 289 aa19.85■□□□□ 0.77
APP-215ENST00000474136 P3H4Q92791 437 aa19.85■□□□□ 0.77
APP-215ENST00000474136 RUNDC3BQ96NL0 473 aa19.85■□□□□ 0.77
APP-215ENST00000474136 SLC25A23Q9BV35 468 aa19.85■□□□□ 0.77
APP-215ENST00000474136 ARFGAP3Q9NP61 516 aa19.85■□□□□ 0.77
APP-215ENST00000474136 FEZ2Q9UHY8 353 aaPredicted RBP19.85■□□□□ 0.77
APP-215ENST00000474136 HIVEP3Q5T1R4 2406 aa19.84■□□□□ 0.77
APP-215ENST00000474136 OR5K4A6NMS3 321 aa19.84■□□□□ 0.77
APP-215ENST00000474136 TCP11X1B4DZS4 312 aa19.84■□□□□ 0.77
APP-215ENST00000474136 GRID2O43424 1007 aa19.84■□□□□ 0.77
APP-215ENST00000474136 RECKO95980 971 aa19.84■□□□□ 0.77
APP-215ENST00000474136 AMD1P17707 334 aa19.84■□□□□ 0.77
APP-215ENST00000474136 SLC19A1P41440 591 aa19.84■□□□□ 0.77
APP-215ENST00000474136 CCL11P51671 97 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms