RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 TTPAP49638 278 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 PRLHRP49683 370 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 DRG2P55039 364 aaKnown RBP13.51□□□□□ -0.25
USF1-205ENST00000473969 CCL7P80098 99 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 B4GALNT1Q00973 533 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 GSTM4Q03013 218 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 C2orf54Q08AI8 447 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 DMPKQ09013 629 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 TARDBPQ13148 414 aaKnown RBP eCLIP13.51□□□□□ -0.25
USF1-205ENST00000473969 THOC5Q13769 683 aaKnown RBP13.51□□□□□ -0.25
USF1-205ENST00000473969 TUBB2AQ13885 445 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 MORF4L2Q15014 288 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 AMZ1Q400G9 498 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 AGAP9Q5VTM2 703 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 MRNIPQ6NTE8 343 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 CES3Q6UWW8 571 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 ABRAXAS1Q6UWZ7 409 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 WASH2PQ6VEQ5 465 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 CCNI2Q6ZMN8 369 aaPredicted RBP13.51□□□□□ -0.25
USF1-205ENST00000473969 C11orf96Q7Z7L8 435 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 CFAP206Q8IYR0 622 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 PDIK1LQ8N165 341 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 GABPB2Q8TAK5 448 aaPredicted RBP13.51□□□□□ -0.25
USF1-205ENST00000473969 HM13Q8TCT9 377 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 SLC37A2Q8TED4 501 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 MFSD3Q96ES6 412 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 LINC00615Q96LM1 132 aaPredicted RBP13.51□□□□□ -0.25
USF1-205ENST00000473969 TRIM51Q9BSJ1 452 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 CCM2Q9BSQ5 444 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 TUBB2BQ9BVA1 445 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 WASH6PQ9NQA3 447 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 TREX1Q9NSU2 369 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 KCNK4Q9NYG8 393 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 CPNE7Q9UBL6 633 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 FAM8A1Q9UBU6 413 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 SCN8AQ9UQD0 1980 aa13.51□□□□□ -0.25
USF1-205ENST00000473969 C17orf113A0A1B0GUU1 675 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 FAM237BA0A1B0GVD1 139 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 TMX2-CTNND1H3BSU7 103 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 PPM1DO15297 605 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 EML2O95834 649 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 POLBP06746 335 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 SLC35G4P0C7Q5 338 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 XRCC1P18887 633 aaPredicted RBP13.5□□□□□ -0.25
USF1-205ENST00000473969 CLDN6P56747 220 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 CALCOCO2Q13137 446 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 NFE2L1Q14494 772 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 KRT33BQ14525 404 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 WHAMMP3Q1A5X7 153 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 MAP9Q49MG5 647 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 KIAA0930Q6ICG6 404 aaPredicted RBP13.5□□□□□ -0.25
USF1-205ENST00000473969 PACS1Q6VY07 963 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 SPRED1Q7Z699 444 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 RBM12BQ8IXT5 1001 aaKnown RBP13.5□□□□□ -0.25
USF1-205ENST00000473969 MPP5Q8N3R9 675 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 DCBLD1Q8N8Z6 715 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 OR10G6Q8NH81 332 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 KIF18AQ8NI77 898 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 ZNF669Q96BR6 464 aaPredicted RBP13.5□□□□□ -0.25
USF1-205ENST00000473969 GRAMD1AQ96CP6 724 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 STAMBPL1Q96FJ0 436 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 TMEM74Q96NL1 305 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 POT1Q9NUX5 634 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 RABGEF1Q9UJ41 708 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 WASF3Q9UPY6 502 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 UTP11Q9Y3A2 253 aaKnown RBP13.5□□□□□ -0.25
USF1-205ENST00000473969 RPS6KL1Q9Y6S9 549 aa13.5□□□□□ -0.25
USF1-205ENST00000473969 GOLGA4Q13439 2230 aaKnown RBP13.49□□□□□ -0.25
USF1-205ENST00000473969 A6NCN8 305 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 IFRD1O00458 451 aaPredicted RBP13.49□□□□□ -0.25
USF1-205ENST00000473969 CSO75390 466 aaKnown RBP13.49□□□□□ -0.25
USF1-205ENST00000473969 USP1O94782 785 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 ITGA8P53708 1063 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 ARL4CP56559 192 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 OR1D5P58170 312 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 GPLD1P80108 840 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 CLPPQ16740 277 aaPredicted RBP13.49□□□□□ -0.25
USF1-205ENST00000473969 BBS9Q3SYG4 887 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 ANKRD20A4Q4UJ75 823 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 SYTL3Q4VX76 610 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.49□□□□□ -0.25
USF1-205ENST00000473969 RNF187Q5TA31 235 aaPredicted RBP13.49□□□□□ -0.25
USF1-205ENST00000473969 CDCP2Q5VXM1 449 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 METRNLQ641Q3 311 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 PTRHD1Q6GMV3 140 aaKnown RBP13.49□□□□□ -0.25
USF1-205ENST00000473969 ZNF438Q7Z4V0 828 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 PIM3Q86V86 326 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 CLDN19Q8N6F1 224 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 MNS1Q8NEH6 495 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 CALML6Q8TD86 181 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 NAT14Q8WUY8 206 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 DPYSL5Q9BPU6 564 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 NAT9Q9BTE0 207 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 STRADBQ9C0K7 418 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 RAB17Q9H0T7 212 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.49□□□□□ -0.25
USF1-205ENST00000473969 PSMD13Q9UNM6 376 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 VPS9D1Q9Y2B5 631 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 SNX24Q9Y343 169 aa13.49□□□□□ -0.25
USF1-205ENST00000473969 HEBP2Q9Y5Z4 205 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms