RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 COX4I2Q96KJ9 171 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 ING2Q9H160 280 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 ANKRD36A6QL64 1941 aa20.86■□□□□ 0.93
COL18A1-207ENST00000473212 UPK1AO00322 258 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 SCAMP3O14828 347 aaKnown RBP20.85■□□□□ 0.93
COL18A1-207ENST00000473212 CBFA2T3O75081 653 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 TSPAN12O95859 305 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 MBL2P11226 248 aaPredicted RBP20.85■□□□□ 0.93
COL18A1-207ENST00000473212 CDH1P12830 882 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 HTR6P50406 440 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 BMXP51813 675 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 ILF2Q12905 390 aaKnown RBP20.85■□□□□ 0.93
COL18A1-207ENST00000473212 KCNA10Q16322 511 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 PARP15Q460N3 678 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 GLT6D1Q7Z4J2 308 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 DTWD1Q8N5C7 304 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 PDPRQ8NCN5 879 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 DDHD1Q8NEL9 900 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 PNPT1Q8TCS8 783 aaKnown RBP20.85■□□□□ 0.93
COL18A1-207ENST00000473212 TMBIM1Q969X1 311 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 ISG20Q96AZ6 181 aaKnown RBP20.85■□□□□ 0.93
COL18A1-207ENST00000473212 TMEM9Q9P0T7 183 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 FKBPLQ9UIM3 349 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 GABRQQ9UN88 632 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 GBF1Q92538 1859 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 J3QRK9 145 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 ATP6V1G1O75348 118 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 NDUFS3O75489 264 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 RSL1D1O76021 490 aaKnown RBP20.85■□□□□ 0.93
COL18A1-207ENST00000473212 PRLP01236 227 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 TACR2P21452 398 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 ARL1P40616 181 aaPredicted RBP20.85■□□□□ 0.93
COL18A1-207ENST00000473212 SGSHP51688 502 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 HUNKP57058 714 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 CTXN3Q4LDR2 81 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 CLEC4FQ8N1N0 589 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 SFRP1Q8N474 314 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 EFHBQ8N7U6 833 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 BPIFB6Q8NFQ5 453 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 LINC01599Q8WXQ3 324 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 SNX19Q92543 992 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 FBXL8Q96CD0 374 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 C8orf48Q96LL4 319 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 LTB4R2Q9NPC1 389 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 ZIM2Q9NZV7 527 aa20.85■□□□□ 0.93
COL18A1-207ENST00000473212 NDST3O95803 873 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 MLYCDO95822 493 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 CYBAP13498 195 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 ALDH3A2P51648 485 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 FXNQ16595 210 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 MOGQ16653 247 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 GPRIN3Q6ZVF9 776 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 EFL1Q7Z2Z2 1120 aaKnown RBP20.84■□□□□ 0.93
COL18A1-207ENST00000473212 STK32CQ86UX6 486 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 ZFAND4Q86XD8 727 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 LEMD2Q8NC56 503 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 OR56A4Q8NGH8 313 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 SGCDQ92629 289 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 UROC1Q96N76 676 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 GPR62Q9BZJ7 368 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 ADNPQ9H2P0 1102 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 PCDHB5Q9Y5E4 795 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 DYTNA2CJ06 578 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 STX16O14662 325 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 VNN2O95498 520 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 TPP2P29144 1249 aaPredicted RBP20.84■□□□□ 0.93
COL18A1-207ENST00000473212 CCR3P51677 355 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 PRKG2Q13237 762 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 DAG1Q14118 895 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 TGFBIQ15582 683 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 CTSL3PQ5NE16 218 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 DCDC5Q6ZRR9 648 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 LPCAT1Q8NF37 534 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 GLT1D1Q96MS3 346 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 NLE1Q9NVX2 485 aaPredicted RBP20.84■□□□□ 0.93
COL18A1-207ENST00000473212 MAGEL2Q9UJ55 1249 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 PCDHB3Q9Y5E6 796 aa20.84■□□□□ 0.93
COL18A1-207ENST00000473212 EPOP01588 193 aa20.83■□□□□ 0.93
COL18A1-207ENST00000473212 GATMP50440 423 aa20.83■□□□□ 0.93
COL18A1-207ENST00000473212 DSC1Q08554 894 aa20.83■□□□□ 0.93
COL18A1-207ENST00000473212 ATP6AP1LQ52LC2 224 aa20.83■□□□□ 0.93
COL18A1-207ENST00000473212 FAM171A1Q5VUB5 890 aa20.83■□□□□ 0.93
COL18A1-207ENST00000473212 BROXQ5VW32 411 aa20.83■□□□□ 0.93
COL18A1-207ENST00000473212 XAF1Q6GPH4 301 aa20.83■□□□□ 0.93
COL18A1-207ENST00000473212 DLEU7Q6UYE1 221 aa20.83■□□□□ 0.93
COL18A1-207ENST00000473212 Q6ZSR9 355 aa20.83■□□□□ 0.93
COL18A1-207ENST00000473212 PDZD8Q8NEN9 1154 aa20.83■□□□□ 0.93
COL18A1-207ENST00000473212 CNDP2Q96KP4 475 aaKnown RBP20.83■□□□□ 0.93
COL18A1-207ENST00000473212 C1QTNF3Q9BXJ4 246 aa20.83■□□□□ 0.93
COL18A1-207ENST00000473212 RIC8BQ9NVN3 520 aa20.83■□□□□ 0.93
COL18A1-207ENST00000473212 DOLKQ9UPQ8 538 aa20.83■□□□□ 0.93
COL18A1-207ENST00000473212 ZFP37Q9Y6Q3 630 aaPredicted RBP20.83■□□□□ 0.93
COL18A1-207ENST00000473212 TLR5O60602 858 aa20.83■□□□□ 0.92
COL18A1-207ENST00000473212 DEAF1O75398 565 aaPredicted RBP20.83■□□□□ 0.92
COL18A1-207ENST00000473212 SEC14L2O76054 403 aa20.83■□□□□ 0.92
COL18A1-207ENST00000473212 ALPLP05186 524 aa20.83■□□□□ 0.92
COL18A1-207ENST00000473212 OCM2P0CE71 109 aa20.83■□□□□ 0.92
COL18A1-207ENST00000473212 OCMP0CE72 109 aaPredicted RBP20.83■□□□□ 0.92
COL18A1-207ENST00000473212 THRBP10828 461 aa20.83■□□□□ 0.92
COL18A1-207ENST00000473212 CD97P48960 835 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms