RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 AGO1Q9UL18 857 aaKnown RBP13.48□□□□□ -0.25
BRCA1-209ENST00000470026 CDC14AQ9UNH5 594 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 RAI2Q9Y5P3 530 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 HEMK1Q9Y5R4 338 aaPredicted RBP13.48□□□□□ -0.25
BRCA1-209ENST00000470026 GIPC1O14908 333 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 LSM1O15116 133 aaKnown RBP13.48□□□□□ -0.25
BRCA1-209ENST00000470026 CLDN11O75508 207 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 SNAP29O95721 258 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 COL6A1P12109 1028 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 CKBP12277 381 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 TRIM32Q13049 653 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 AARS2Q5JTZ9 985 aaKnown RBP13.48□□□□□ -0.25
BRCA1-209ENST00000470026 GLYATQ6IB77 296 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 CHST9Q7L1S5 443 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 GALNT13Q8IUC8 556 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 CPNE9Q8IYJ1 553 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 LPCAT1Q8NF37 534 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 MAGEE2Q8TD90 523 aaPredicted RBP13.48□□□□□ -0.25
BRCA1-209ENST00000470026 C2orf15Q8WU43 125 aaKnown RBP13.48□□□□□ -0.25
BRCA1-209ENST00000470026 NSMCE2Q96MF7 247 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 FAM193BQ96PV7 902 aaPredicted RBP13.48□□□□□ -0.25
BRCA1-209ENST00000470026 CWH43Q9H720 699 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 PLGRKTQ9HBL7 147 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 MARCH5Q9NX47 278 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 CD274Q9NZQ7 290 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 DNMT3LQ9UJW3 386 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 GABRQQ9UN88 632 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 DHRS7Q9Y394 339 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 CCL27Q9Y4X3 112 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 PCDHGA11Q9Y5H2 935 aa13.48□□□□□ -0.25
BRCA1-209ENST00000470026 SLC38A8A6NNN8 435 aa13.47□□□□□ -0.25
BRCA1-209ENST00000470026 H3BMQ9 156 aa13.47□□□□□ -0.25
BRCA1-209ENST00000470026 CD160O95971 181 aa13.47□□□□□ -0.25
BRCA1-209ENST00000470026 JUNBP17275 347 aaPredicted RBP13.47□□□□□ -0.25
BRCA1-209ENST00000470026 GGT1P19440 569 aa13.47□□□□□ -0.25
BRCA1-209ENST00000470026 JAK1P23458 1154 aa13.47□□□□□ -0.25
BRCA1-209ENST00000470026 SLC11A2P49281 568 aa13.47□□□□□ -0.25
BRCA1-209ENST00000470026 HTR6P50406 440 aa13.47□□□□□ -0.25
BRCA1-209ENST00000470026 RPS24P62847 133 aaKnown RBP13.47□□□□□ -0.25
BRCA1-209ENST00000470026 RAB39AQ14964 217 aa13.47□□□□□ -0.25
BRCA1-209ENST00000470026 EGFL6Q8IUX8 553 aa13.47□□□□□ -0.25
BRCA1-209ENST00000470026 DTWD1Q8N5C7 304 aa13.47□□□□□ -0.25
BRCA1-209ENST00000470026 AADATQ8N5Z0 425 aa13.47□□□□□ -0.25
BRCA1-209ENST00000470026 OR8J3Q8NGG0 315 aa13.47□□□□□ -0.25
BRCA1-209ENST00000470026 RNF217Q8TC41 542 aa13.47□□□□□ -0.25
BRCA1-209ENST00000470026 FNDC8Q8TC99 324 aa13.47□□□□□ -0.25
BRCA1-209ENST00000470026 EXOC2Q96KP1 924 aa13.47□□□□□ -0.25
BRCA1-209ENST00000470026 COG8Q96MW5 612 aa13.47□□□□□ -0.25
BRCA1-209ENST00000470026 CGREF1Q99674 301 aa13.47□□□□□ -0.25
BRCA1-209ENST00000470026 SEPT5Q99719 369 aaPredicted RBP13.47□□□□□ -0.25
BRCA1-209ENST00000470026 SPON2Q9BUD6 331 aa13.47□□□□□ -0.25
BRCA1-209ENST00000470026 ADGRE3Q9BY15 652 aa13.47□□□□□ -0.25
BRCA1-209ENST00000470026 TMEM9Q9P0T7 183 aa13.47□□□□□ -0.25
BRCA1-209ENST00000470026 TNPO3Q9Y5L0 923 aaKnown RBP13.47□□□□□ -0.25
BRCA1-209ENST00000470026 OR7A17O14581 309 aa13.46□□□□□ -0.25
BRCA1-209ENST00000470026 SEC24DO94855 1032 aaPredicted RBP13.46□□□□□ -0.25
BRCA1-209ENST00000470026 ATE1O95260 518 aa13.46□□□□□ -0.25
BRCA1-209ENST00000470026 RAP2AP10114 183 aa13.46□□□□□ -0.25
BRCA1-209ENST00000470026 ATF6P18850 670 aa13.46□□□□□ -0.25
BRCA1-209ENST00000470026 ATP5C1P36542 298 aaKnown RBP13.46□□□□□ -0.25
BRCA1-209ENST00000470026 RANBP1P43487 201 aa13.46□□□□□ -0.25
BRCA1-209ENST00000470026 ZNF157P51786 506 aaPredicted RBP13.46□□□□□ -0.25
BRCA1-209ENST00000470026 TRAF2Q12933 501 aa13.46□□□□□ -0.25
BRCA1-209ENST00000470026 CRHR2Q13324 411 aa13.46□□□□□ -0.25
BRCA1-209ENST00000470026 PWP1Q13610 501 aa13.46□□□□□ -0.25
BRCA1-209ENST00000470026 SELPLGQ14242 412 aa13.46□□□□□ -0.25
BRCA1-209ENST00000470026 KLHL35Q6PF15 583 aa13.46□□□□□ -0.25
BRCA1-209ENST00000470026 CYP20A1Q6UW02 462 aa13.46□□□□□ -0.25
BRCA1-209ENST00000470026 SBSNQ6UWP8 590 aa13.46□□□□□ -0.25
BRCA1-209ENST00000470026 OFCC1Q8IZS5 231 aa13.46□□□□□ -0.25
BRCA1-209ENST00000470026 STK40Q8N2I9 435 aa13.46□□□□□ -0.25
BRCA1-209ENST00000470026 PPP1R14BQ96C90 147 aa13.46□□□□□ -0.25
BRCA1-209ENST00000470026 CEP295NLQ96MC4 621 aa13.46□□□□□ -0.25
BRCA1-209ENST00000470026 PHF12Q96QT6 1004 aa13.46□□□□□ -0.25
BRCA1-209ENST00000470026 TMEM161AQ9NX61 479 aa13.46□□□□□ -0.25
BRCA1-209ENST00000470026 PKD2L2Q9NZM6 624 aa13.46□□□□□ -0.25
BRCA1-209ENST00000470026 PCDHGC4Q9Y5F7 938 aa13.46□□□□□ -0.25
BRCA1-209ENST00000470026 STX7O15400 261 aaKnown RBP13.46□□□□□ -0.26
BRCA1-209ENST00000470026 FZD6O60353 706 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 ALPLP05186 524 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 CAPN1P07384 714 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 ANXA6P08133 673 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 G6PDP11413 515 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 STT3AP46977 705 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 GALK1P51570 392 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 ALDH3A2P51648 485 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 ARSFP54793 590 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 DAG1Q14118 895 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 SMU1Q2TAY7 513 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 NCEH1Q6PIU2 408 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 ELMSAN1Q6PJG2 1045 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 FKBP9P1Q75LS8 142 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 GOLGA7Q7Z5G4 137 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 CARNMT1Q8N4J0 409 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 PCSK9Q8NBP7 692 aaKnown RBP13.46□□□□□ -0.26
BRCA1-209ENST00000470026 OR52E4Q8NGH9 312 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 B3GALT6Q96L58 329 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 RNF145Q96MT1 663 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 RDH12Q96NR8 316 aa13.46□□□□□ -0.26
BRCA1-209ENST00000470026 CDK15Q96Q40 435 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms