RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 RPP25Q9BUL9 199 aaKnown RBP6.36□□□□□ -1.39
PTCD3-208ENST00000469585 SLC2A11Q9BYW1 496 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 WDR12Q9GZL7 423 aaKnown RBP6.36□□□□□ -1.39
PTCD3-208ENST00000469585 GANQ9H2C0 597 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 HEYLQ9NQ87 328 aaPredicted RBP6.36□□□□□ -1.39
PTCD3-208ENST00000469585 PARVAQ9NVD7 372 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 CDC23Q9UJX2 597 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 NME7Q9Y5B8 376 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 PTPRDP23468 1912 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 NCOR1O75376 2440 aa6.36□□□□□ -1.39
PTCD3-208ENST00000469585 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.35□□□□□ -1.39
PTCD3-208ENST00000469585 AQP7P3A6NL99 342 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 M0QYT0 321 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 TRDMT1O14717 391 aaKnown RBP6.35□□□□□ -1.39
PTCD3-208ENST00000469585 MDM4O15151 490 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 CD3EAPO15446 510 aaKnown RBP6.35□□□□□ -1.39
PTCD3-208ENST00000469585 HOXC11O43248 304 aaPredicted RBP6.35□□□□□ -1.39
PTCD3-208ENST00000469585 RNASEH1O60930 286 aaKnown RBP6.35□□□□□ -1.39
PTCD3-208ENST00000469585 SRGAP2O75044 1071 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 GRAP2O75791 330 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 PIAS2O75928 621 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 KAT7O95251 611 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 RASAL1O95294 804 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 NDST3O95803 873 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 TRUB2O95900 331 aaKnown RBP6.35□□□□□ -1.39
PTCD3-208ENST00000469585 TBX18O95935 607 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 ERBB2P04626 1255 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 ADH4P08319 380 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 PNMA6AP0CW24 399 aaPredicted RBP6.35□□□□□ -1.39
PTCD3-208ENST00000469585 HKR1P10072 659 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 TACR2P21452 398 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 CD72P21854 359 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 GABRB3P28472 473 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 RDXP35241 583 aaKnown RBP6.35□□□□□ -1.39
PTCD3-208ENST00000469585 FOLR3P41439 243 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 TNFRSF4P43489 277 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 KLK7P49862 253 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 COPAP53621 1224 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 ITGA8P53708 1063 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 MRPS21P82921 87 aaKnown RBP6.35□□□□□ -1.39
PTCD3-208ENST00000469585 CSTF1Q05048 431 aaKnown RBP6.35□□□□□ -1.39
PTCD3-208ENST00000469585 KDSRQ06136 332 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 ZNF177Q13360 481 aaPredicted RBP6.35□□□□□ -1.39
PTCD3-208ENST00000469585 PTPRRQ15256 657 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 SPA17Q15506 151 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 SLC25A52Q3SY17 297 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 C10orf76Q5T2E6 689 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 CERCAMQ5T4B2 595 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 Q6ZNX1 250 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 MMS22LQ6ZRQ5 1243 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 FAM183BPQ6ZVS7 135 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 SCD5Q86SK9 330 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 ZNF354CQ86Y25 554 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 MFN1Q8IWA4 741 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 BBS7Q8IWZ6 715 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 CCDC105Q8IYK2 499 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 ULK2Q8IYT8 1036 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 SPARTQ8N0X7 666 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 CPXM2Q8N436 756 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 SPEM1Q8N4L4 309 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 TOR1AIP2Q8NFQ8 470 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 OR8K1Q8NGG5 319 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 CTNNBL1Q8WYA6 563 aaPredicted RBP6.35□□□□□ -1.39
PTCD3-208ENST00000469585 ZNF566Q969W8 418 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 AZIN2Q96A70 460 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 FAM122AQ96E09 287 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 CCDC114Q96M63 670 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 RPRD1AQ96P16 312 aaPredicted RBP6.35□□□□□ -1.39
PTCD3-208ENST00000469585 C11orf70Q9BRQ4 267 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 CIPCQ9C0C6 399 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 XPO4Q9C0E2 1151 aaKnown RBP6.35□□□□□ -1.39
PTCD3-208ENST00000469585 TMEM30AQ9NV96 361 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 HAUS2Q9NVX0 235 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 AIPL1Q9NZN9 384 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 FBXO4Q9UKT5 387 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 HPCAL4Q9UM19 191 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 DOCK8Q8NF50 2099 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 MYO10Q9HD67 2058 aa6.35□□□□□ -1.39
PTCD3-208ENST00000469585 ZAR1LA6NP61 321 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 TMCO5BA8MYB1 307 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 KCNU1A8MYU2 1149 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 AKR1B15C9JRZ8 316 aaPredicted RBP6.34□□□□□ -1.39
PTCD3-208ENST00000469585 TULP2O00295 520 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 PAPSS1O43252 624 aaPredicted RBP6.34□□□□□ -1.39
PTCD3-208ENST00000469585 MSI1O43347 362 aaKnown RBP6.34□□□□□ -1.39
PTCD3-208ENST00000469585 CACNG3O60359 315 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 ACSL4O60488 711 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 TBL1XO60907 577 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 RTN2O75298 545 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 LUC7L3O95232 432 aaKnown RBP6.34□□□□□ -1.39
PTCD3-208ENST00000469585 ACADMP11310 421 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 GZMAP12544 262 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 KRT4P19013 534 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 POLR2EP19388 210 aaKnown RBP6.34□□□□□ -1.39
PTCD3-208ENST00000469585 GPD1P21695 349 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 CDH5P33151 784 aaPredicted RBP6.34□□□□□ -1.39
PTCD3-208ENST00000469585 CYLC1P35663 651 aaPredicted RBP6.34□□□□□ -1.39
PTCD3-208ENST00000469585 MPLP40238 635 aa6.34□□□□□ -1.39
PTCD3-208ENST00000469585 SSR1P43307 286 aaKnown RBP6.34□□□□□ -1.39
PTCD3-208ENST00000469585 GABRB2P47870 512 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms