RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 B4GALNT1Q00973 533 aa14.28□□□□□ -0.12
COL27A1-203ENST00000468565 CLPPQ16740 277 aaPredicted RBP14.28□□□□□ -0.12
COL27A1-203ENST00000468565 GLT6D1Q7Z4J2 308 aa14.28□□□□□ -0.12
COL27A1-203ENST00000468565 KLHDC8BQ8IXV7 354 aa14.28□□□□□ -0.12
COL27A1-203ENST00000468565 Q8N9G6 341 aaPredicted RBP14.28□□□□□ -0.12
COL27A1-203ENST00000468565 TMEM74Q96NL1 305 aa14.28□□□□□ -0.12
COL27A1-203ENST00000468565 ROPN1BQ9BZX4 212 aaPredicted RBP14.28□□□□□ -0.12
COL27A1-203ENST00000468565 RABEP2Q9H5N1 569 aa14.28□□□□□ -0.12
COL27A1-203ENST00000468565 ROPN1Q9HAT0 212 aaPredicted RBP14.28□□□□□ -0.12
COL27A1-203ENST00000468565 BPIFA1Q9NP55 256 aa14.28□□□□□ -0.12
COL27A1-203ENST00000468565 GEMIN8Q9NWZ8 242 aaKnown RBP14.28□□□□□ -0.12
COL27A1-203ENST00000468565 IL17CQ9P0M4 197 aa14.28□□□□□ -0.12
COL27A1-203ENST00000468565 SATB2Q9UPW6 733 aa14.28□□□□□ -0.12
COL27A1-203ENST00000468565 FAM208BQ5VWN6 2430 aa14.28□□□□□ -0.12
COL27A1-203ENST00000468565 CCDC187A0A096LP49 1063 aa14.27□□□□□ -0.12
COL27A1-203ENST00000468565 TLDC2A0PJX2 215 aa14.27□□□□□ -0.12
COL27A1-203ENST00000468565 C5orf60A6NFR6 353 aa14.27□□□□□ -0.12
COL27A1-203ENST00000468565 RHPN2P1A8MT19 583 aa14.27□□□□□ -0.12
COL27A1-203ENST00000468565 CHUKO15111 745 aa14.27□□□□□ -0.12
COL27A1-203ENST00000468565 ZNF8P17098 575 aaPredicted RBP14.27□□□□□ -0.12
COL27A1-203ENST00000468565 IVDP26440 423 aa14.27□□□□□ -0.12
COL27A1-203ENST00000468565 SPAM1P38567 509 aa14.27□□□□□ -0.12
COL27A1-203ENST00000468565 EIF2S3P41091 472 aaKnown RBP14.27□□□□□ -0.12
COL27A1-203ENST00000468565 MLLT3P42568 568 aaPredicted RBP14.27□□□□□ -0.12
COL27A1-203ENST00000468565 GPR3P46089 330 aa14.27□□□□□ -0.12
COL27A1-203ENST00000468565 CLCNKAP51800 687 aa14.27□□□□□ -0.12
COL27A1-203ENST00000468565 ERVPABLB-1P60509 514 aa14.27□□□□□ -0.12
COL27A1-203ENST00000468565 EIF3IQ13347 325 aaKnown RBP14.27□□□□□ -0.12
COL27A1-203ENST00000468565 C3orf38Q5JPI3 329 aa14.27□□□□□ -0.12
COL27A1-203ENST00000468565 RANBP10Q6VN20 620 aa14.27□□□□□ -0.12
COL27A1-203ENST00000468565 CHST15Q7LFX5 561 aaPredicted RBP14.27□□□□□ -0.12
COL27A1-203ENST00000468565 GSTA5Q7RTV2 222 aa14.27□□□□□ -0.12
COL27A1-203ENST00000468565 ADGRG6Q86SQ4 1221 aa14.27□□□□□ -0.12
COL27A1-203ENST00000468565 WDR36Q8NI36 951 aaKnown RBP14.27□□□□□ -0.12
COL27A1-203ENST00000468565 CCDC110Q8TBZ0 833 aa14.27□□□□□ -0.12
COL27A1-203ENST00000468565 BLOC1S5Q8TDH9 187 aa14.27□□□□□ -0.12
COL27A1-203ENST00000468565 PATE1Q8WXA2 126 aa14.27□□□□□ -0.12
COL27A1-203ENST00000468565 FICDQ9BVA6 458 aa14.27□□□□□ -0.12
COL27A1-203ENST00000468565 FOXP3Q9BZS1 431 aa14.27□□□□□ -0.12
COL27A1-203ENST00000468565 NEU2Q9Y3R4 380 aa14.27□□□□□ -0.12
COL27A1-203ENST00000468565 DSPP15924 2871 aaKnown RBP14.27□□□□□ -0.13
COL27A1-203ENST00000468565 A0A1W2PNU3 283 aaPredicted RBP14.27□□□□□ -0.13
COL27A1-203ENST00000468565 E7EVH7 732 aa14.27□□□□□ -0.13
COL27A1-203ENST00000468565 RASGRF2O14827 1237 aa14.27□□□□□ -0.13
COL27A1-203ENST00000468565 VEGFDO43915 354 aa14.27□□□□□ -0.13
COL27A1-203ENST00000468565 FASLGP48023 281 aa14.27□□□□□ -0.13
COL27A1-203ENST00000468565 INHBCP55103 352 aa14.27□□□□□ -0.13
COL27A1-203ENST00000468565 TRIP13Q15645 432 aaPredicted RBP14.27□□□□□ -0.13
COL27A1-203ENST00000468565 DRICH1Q6PGQ1 229 aaPredicted RBP14.27□□□□□ -0.13
COL27A1-203ENST00000468565 MICALCLQ6ZW33 695 aa14.27□□□□□ -0.13
COL27A1-203ENST00000468565 SLC35B2Q8TB61 432 aa14.27□□□□□ -0.13
COL27A1-203ENST00000468565 STRADBQ9C0K7 418 aa14.27□□□□□ -0.13
COL27A1-203ENST00000468565 OR2AG1Q9H205 316 aa14.27□□□□□ -0.13
COL27A1-203ENST00000468565 CDC42EP4Q9H3Q1 356 aaKnown RBP14.27□□□□□ -0.13
COL27A1-203ENST00000468565 IL26Q9NPH9 171 aa14.27□□□□□ -0.13
COL27A1-203ENST00000468565 ASCL3Q9NQ33 180 aa14.27□□□□□ -0.13
COL27A1-203ENST00000468565 PKP3Q9Y446 797 aa14.27□□□□□ -0.13
COL27A1-203ENST00000468565 PRKAB1Q9Y478 270 aa14.27□□□□□ -0.13
COL27A1-203ENST00000468565 NDC80O14777 642 aa14.26□□□□□ -0.13
COL27A1-203ENST00000468565 B4GAT1O43505 415 aa14.26□□□□□ -0.13
COL27A1-203ENST00000468565 LIASO43766 372 aa14.26□□□□□ -0.13
COL27A1-203ENST00000468565 FAM107AO95990 144 aa14.26□□□□□ -0.13
COL27A1-203ENST00000468565 ACP5P13686 325 aa14.26□□□□□ -0.13
COL27A1-203ENST00000468565 SLC2A4P14672 509 aa14.26□□□□□ -0.13
COL27A1-203ENST00000468565 BIRC2Q13490 618 aa14.26□□□□□ -0.13
COL27A1-203ENST00000468565 ATP13A5Q4VNC0 1218 aa14.26□□□□□ -0.13
COL27A1-203ENST00000468565 B3GNT8Q7Z7M8 397 aa14.26□□□□□ -0.13
COL27A1-203ENST00000468565 SFRP1Q8N474 314 aa14.26□□□□□ -0.13
COL27A1-203ENST00000468565 ZNF473Q8WTR7 871 aaKnown RBP14.26□□□□□ -0.13
COL27A1-203ENST00000468565 PRR11Q96HE9 360 aaPredicted RBP14.26□□□□□ -0.13
COL27A1-203ENST00000468565 TMPRSS11EQ9UL52 423 aa14.26□□□□□ -0.13
COL27A1-203ENST00000468565 CHD6Q8TD26 2715 aa14.26□□□□□ -0.13
COL27A1-203ENST00000468565 GMNCA6NCL1 334 aa14.25□□□□□ -0.13
COL27A1-203ENST00000468565 A6NCN8 305 aa14.25□□□□□ -0.13
COL27A1-203ENST00000468565 SMIM23A6NLE4 172 aa14.25□□□□□ -0.13
COL27A1-203ENST00000468565 MYO1CO00159 1063 aa14.25□□□□□ -0.13
COL27A1-203ENST00000468565 RRP8O43159 456 aaKnown RBP14.25□□□□□ -0.13
COL27A1-203ENST00000468565 CPNE6O95741 557 aa14.25□□□□□ -0.13
COL27A1-203ENST00000468565 RBMS1P29558 406 aaKnown RBP14.25□□□□□ -0.13
COL27A1-203ENST00000468565 PCBP4P57723 403 aaKnown RBP14.25□□□□□ -0.13
COL27A1-203ENST00000468565 ZFP36L1Q07352 338 aaKnown RBP14.25□□□□□ -0.13
COL27A1-203ENST00000468565 ITGA9Q13797 1035 aa14.25□□□□□ -0.13
COL27A1-203ENST00000468565 TAF1AQ15573 450 aaPredicted RBP14.25□□□□□ -0.13
COL27A1-203ENST00000468565 PARP6Q2NL67 630 aa14.25□□□□□ -0.13
COL27A1-203ENST00000468565 ZNF648Q5T619 568 aaPredicted RBP14.25□□□□□ -0.13
COL27A1-203ENST00000468565 IZUMO3Q5VZ72 239 aa14.25□□□□□ -0.13
COL27A1-203ENST00000468565 ARHGEF18Q6ZSZ5 1173 aa14.25□□□□□ -0.13
COL27A1-203ENST00000468565 UHMK1Q8TAS1 419 aaKnown RBP14.25□□□□□ -0.13
COL27A1-203ENST00000468565 BRSK1Q8TDC3 778 aa14.25□□□□□ -0.13
COL27A1-203ENST00000468565 SLC37A2Q8TED4 501 aa14.25□□□□□ -0.13
COL27A1-203ENST00000468565 SLC46A1Q96NT5 459 aa14.25□□□□□ -0.13
COL27A1-203ENST00000468565 DCBLD2Q96PD2 775 aa14.25□□□□□ -0.13
COL27A1-203ENST00000468565 CCT8L2Q96SF2 557 aa14.25□□□□□ -0.13
COL27A1-203ENST00000468565 C19orf43Q9BQ61 176 aa14.25□□□□□ -0.13
COL27A1-203ENST00000468565 FRMD8P1Q9BZ68 369 aaPredicted RBP14.25□□□□□ -0.13
COL27A1-203ENST00000468565 LRRC4CQ9HCJ2 640 aa14.25□□□□□ -0.13
COL27A1-203ENST00000468565 PPANQ9NQ55 473 aaKnown RBP14.25□□□□□ -0.13
COL27A1-203ENST00000468565 THSD1Q9NS62 852 aa14.25□□□□□ -0.13
COL27A1-203ENST00000468565 ATXN7L1Q9ULK2 861 aaPredicted RBP14.25□□□□□ -0.13
COL27A1-203ENST00000468565 KCNK6Q9Y257 313 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms