RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 DEFB123Q8N688 67 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 TP53I13Q8NBR0 393 aaPredicted RBP5.47□□□□□ -1.53
VPS41-211ENST00000466017 PPHLN1Q8NEY8 458 aaKnown RBP5.47□□□□□ -1.53
VPS41-211ENST00000466017 OR8D1Q8WZ84 308 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 RAB7BQ96AH8 199 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 FAM131CQ96AQ9 280 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 TLCD1Q96CP7 247 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 MTBPQ96DY7 904 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 MFSD3Q96ES6 412 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 CERS2Q96G23 380 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 CDKN2AIPNLQ96HQ2 116 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 GABRG3Q99928 467 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 KXD1Q9BQD3 176 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 CDH19Q9H159 772 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 MFSD1Q9H3U5 465 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 VPS37BQ9H9H4 285 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 NLE1Q9NVX2 485 aaPredicted RBP5.47□□□□□ -1.53
VPS41-211ENST00000466017 SYBUQ9NX95 663 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 KCTD5Q9NXV2 234 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 OGFRQ9NZT2 677 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 IL17CQ9P0M4 197 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 SENP1Q9P0U3 644 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 NFKBIL1Q9UBC1 381 aaPredicted RBP5.47□□□□□ -1.53
VPS41-211ENST00000466017 CORO1CQ9ULV4 474 aaPredicted RBP5.47□□□□□ -1.53
VPS41-211ENST00000466017 SCML1Q9UN30 329 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 MAD1L1Q9Y6D9 718 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 RPS6KL1Q9Y6S9 549 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 MYO10Q9HD67 2058 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 CHD7Q9P2D1 2997 aa5.47□□□□□ -1.53
VPS41-211ENST00000466017 CHD9Q3L8U1 2897 aa5.46□□□□□ -1.53
VPS41-211ENST00000466017 IQANK1A0A1B0GTG1 560 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 A0A1B0GTL3 188 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 EXOC1LA0A1B0GW35 172 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 TTC34A8MYJ7 566 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 H0Y858 1186 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 BANF1O75531 89 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 RPP40O75818 363 aaKnown RBP5.46□□□□□ -1.54
VPS41-211ENST00000466017 ASGR2P07307 311 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 SNRPAP09012 282 aaKnown RBP5.46□□□□□ -1.54
VPS41-211ENST00000466017 CYP2A6P11509 494 aaPredicted RBP5.46□□□□□ -1.54
VPS41-211ENST00000466017 OGNP20774 298 aaKnown RBP5.46□□□□□ -1.54
VPS41-211ENST00000466017 CD9P21926 228 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 NMBRP28336 390 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 NTSR1P30989 418 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 HOXC12P31275 282 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 SLC8A1P32418 973 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 SPRP35270 261 aaPredicted RBP5.46□□□□□ -1.54
VPS41-211ENST00000466017 GP5P40197 560 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 MSH2P43246 934 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 LEPRP48357 1165 aaKnown RBP5.46□□□□□ -1.54
VPS41-211ENST00000466017 STK19P49842 368 aaPredicted RBP5.46□□□□□ -1.54
VPS41-211ENST00000466017 ADARP55265 1226 aaKnown RBP5.46□□□□□ -1.54
VPS41-211ENST00000466017 CORO7P57737 925 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 ZBTB16Q05516 673 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 GRSF1Q12849 480 aaKnown RBP eCLIP5.46□□□□□ -1.54
VPS41-211ENST00000466017 OLIG2Q13516 323 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 POU6F1Q14863 301 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 CNGA3Q16281 694 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 UGP2Q16851 508 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 KBTBD12Q3ZCT8 623 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 ACCSLQ4AC99 568 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 SLC44A4Q53GD3 710 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 FAM182AQ5T1J6 154 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 SYCP2LQ5T4T6 812 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 ATXN7L2Q5T6C5 722 aaPredicted RBP5.46□□□□□ -1.54
VPS41-211ENST00000466017 FAM46CQ5VWP2 391 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 FOXB2Q5VYV0 432 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 CASC4Q6P4E1 433 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 POMZP3Q6PJE2 187 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 CERS6Q6ZMG9 384 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 SH2D5Q6ZV89 423 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 USP45Q70EL2 814 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 CCDC91Q7Z6B0 441 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 DSG4Q86SJ6 1040 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 ADHFE1Q8IWW8 467 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 NRSN1Q8IZ57 195 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 SLC25A41Q8N5S1 370 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 ARFGAP2Q8N6H7 521 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 CHST14Q8NCH0 376 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 MDGA1Q8NFP4 955 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 OR13J1Q8NGT2 312 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 ACMSDQ8TDX5 336 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 DCAKDQ8WVC6 231 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 RMDN1Q96DB5 314 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 ATP6V1G3Q96LB4 118 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 NELL2Q99435 816 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 CPNE1Q99829 537 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 APOL2Q9BQE5 337 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 IER2Q9BTL4 223 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 OSBPL6Q9BZF3 934 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 TM6SF2Q9BZW4 377 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 CIPCQ9C0C6 399 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 CDIP1Q9H305 208 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 FBRSL1Q9HCM7 1045 aaKnown RBP5.46□□□□□ -1.54
VPS41-211ENST00000466017 PRSS16Q9NQE7 514 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 SMYD2Q9NRG4 433 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 WNT16Q9UBV4 365 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 IL36AQ9UHA7 158 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 DUSP12Q9UNI6 340 aa5.46□□□□□ -1.54
VPS41-211ENST00000466017 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms