RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 NUDT9Q9BW91 350 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 SLC29A3Q9BZD2 475 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 FGF21Q9NSA1 209 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 ERRFI1Q9UJM3 462 aaPredicted RBP11.53□□□□□ -0.56
CNOT4-208ENST00000465721 ANAPC7Q9UJX3 599 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 SHOC2Q9UQ13 582 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 ZNF711Q9Y462 761 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 ZNF451Q9Y4E5 1061 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 PCDHGB7Q9Y5F8 929 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 DCHS2Q6V1P9 2916 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 PDZD2O15018 2839 aa11.53□□□□□ -0.56
CNOT4-208ENST00000465721 C2orf72A6NCS6 295 aa11.52□□□□□ -0.57
CNOT4-208ENST00000465721 TLCD2A6NGC4 264 aa11.52□□□□□ -0.57
CNOT4-208ENST00000465721 DPM1O60762 260 aa11.52□□□□□ -0.57
CNOT4-208ENST00000465721 JCHAINP01591 159 aa11.52□□□□□ -0.57
CNOT4-208ENST00000465721 BPIP17213 487 aa11.52□□□□□ -0.57
CNOT4-208ENST00000465721 RPS15P62841 145 aaKnown RBP11.52□□□□□ -0.57
CNOT4-208ENST00000465721 ACY1Q03154 408 aa11.52□□□□□ -0.57
CNOT4-208ENST00000465721 KLHL30Q0D2K2 578 aa11.52□□□□□ -0.57
CNOT4-208ENST00000465721 SLC10A2Q12908 348 aaPredicted RBP11.52□□□□□ -0.57
CNOT4-208ENST00000465721 IZUMO3Q5VZ72 239 aa11.52□□□□□ -0.57
CNOT4-208ENST00000465721 TMC3Q7Z5M5 1100 aa11.52□□□□□ -0.57
CNOT4-208ENST00000465721 BPHLQ86WA6 291 aaPredicted RBP11.52□□□□□ -0.57
CNOT4-208ENST00000465721 KMT5CQ86Y97 462 aa11.52□□□□□ -0.57
CNOT4-208ENST00000465721 CPNE8Q86YQ8 564 aa11.52□□□□□ -0.57
CNOT4-208ENST00000465721 D2HGDHQ8N465 521 aa11.52□□□□□ -0.57
CNOT4-208ENST00000465721 PQLC3Q8N755 202 aa11.52□□□□□ -0.57
CNOT4-208ENST00000465721 FDCSPQ8NFU4 85 aa11.52□□□□□ -0.57
CNOT4-208ENST00000465721 FAF2Q96CS3 445 aa11.52□□□□□ -0.57
CNOT4-208ENST00000465721 VPS35Q96QK1 796 aa11.52□□□□□ -0.57
CNOT4-208ENST00000465721 ADGRE3Q9BY15 652 aa11.52□□□□□ -0.57
CNOT4-208ENST00000465721 TRIM10Q9UDY6 481 aa11.52□□□□□ -0.57
CNOT4-208ENST00000465721 IP6K2Q9UHH9 426 aa11.52□□□□□ -0.57
CNOT4-208ENST00000465721 FARSAQ9Y285 508 aaKnown RBP11.52□□□□□ -0.57
CNOT4-208ENST00000465721 PKDREJQ9NTG1 2253 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 ZFHX3Q15911 3703 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 SSU72P8A0A1W2PR75 194 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 KCNK1O00180 336 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 SCRG1O75711 98 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 CDK14O94921 469 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 SKILP12757 684 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 CDK11BP21127 795 aaKnown RBP11.51□□□□□ -0.57
CNOT4-208ENST00000465721 GJC1P36383 396 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 TUBB4BP68371 445 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 IFI35P80217 286 aaPredicted RBP11.51□□□□□ -0.57
CNOT4-208ENST00000465721 DMPKQ09013 629 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 TUBB2AQ13885 445 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 GPR19Q15760 415 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 STX1AQ16623 288 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 ATP13A4Q4VNC1 1196 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 DNTTIP2Q5QJE6 756 aaKnown RBP11.51□□□□□ -0.57
CNOT4-208ENST00000465721 FAM182AQ5T1J6 154 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 FAM69BQ5VUD6 431 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 LCN10Q6JVE6 187 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 FAM198BQ6UWH4 519 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 TRAPPC5Q8IUR0 188 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 SLC38A9Q8NBW4 561 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 PRR7Q8TB68 274 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 MR1Q95460 341 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 PNPLA2Q96AD5 504 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 ZNF501Q96CX3 271 aaPredicted RBP11.51□□□□□ -0.57
CNOT4-208ENST00000465721 CD180Q99467 661 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 TUBB2BQ9BVA1 445 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 THAP2Q9H0W7 228 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 CHST8Q9H2A9 424 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 MAGEE1Q9HCI5 957 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 LATS2Q9NRM7 1088 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 RAD18Q9NS91 495 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 ANO10Q9NW15 660 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 CHMP5Q9NZZ3 219 aa11.51□□□□□ -0.57
CNOT4-208ENST00000465721 SETD2Q9BYW2 2564 aaPredicted RBP11.51□□□□□ -0.57
CNOT4-208ENST00000465721 CCDC168Q8NDH2 2452 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 TMEM63AO94886 807 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 VCLP18206 1134 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 MX2P20592 715 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 HALP42357 657 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 ITGA1P56199 1179 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 HSD11B2P80365 405 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 PDE1BQ01064 536 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 PPIDQ08752 370 aaKnown RBP11.5□□□□□ -0.57
CNOT4-208ENST00000465721 RPE65Q16518 533 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 ATP13A5Q4VNC0 1218 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 HGSNATQ68CP4 663 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 KLHL35Q6PF15 583 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 FAM83HQ6ZRV2 1179 aaPredicted RBP11.5□□□□□ -0.57
CNOT4-208ENST00000465721 HPS6Q86YV9 775 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 TMEM126BQ8IUX1 230 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 RHOT1Q8IXI2 618 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 ENDOVQ8N8Q3 282 aaKnown RBP11.5□□□□□ -0.57
CNOT4-208ENST00000465721 GLIS1Q8NBF1 620 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 OR8K5Q8NH50 307 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 TADA1Q96BN2 335 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 C19orf60Q96EN9 201 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 IMP4Q96G21 291 aaKnown RBP11.5□□□□□ -0.57
CNOT4-208ENST00000465721 LRFN5Q96NI6 719 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 CEP41Q9BYV8 373 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 SLAMF7Q9NQ25 335 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 LMBRD1Q9NUN5 540 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 TCFL5Q9UL49 500 aa11.5□□□□□ -0.57
CNOT4-208ENST00000465721 SNX7Q9UNH6 387 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms