RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 HMGCLP35914 325 aa16.92■□□□□ 0.3
HMGN1-210ENST00000464078 RPS15P62841 145 aaKnown RBP16.92■□□□□ 0.3
HMGN1-210ENST00000464078 HSD11B2P80365 405 aa16.92■□□□□ 0.3
HMGN1-210ENST00000464078 TMEM115Q12893 351 aaPredicted RBP16.92■□□□□ 0.3
HMGN1-210ENST00000464078 GTF2H3Q13889 308 aa16.92■□□□□ 0.3
HMGN1-210ENST00000464078 KCNAB1Q14722 419 aa16.92■□□□□ 0.3
HMGN1-210ENST00000464078 ATP13A5Q4VNC0 1218 aa16.92■□□□□ 0.3
HMGN1-210ENST00000464078 IZUMO3Q5VZ72 239 aa16.92■□□□□ 0.3
HMGN1-210ENST00000464078 CARFQ8N187 725 aa16.92■□□□□ 0.3
HMGN1-210ENST00000464078 D2HGDHQ8N465 521 aa16.92■□□□□ 0.3
HMGN1-210ENST00000464078 OR8K5Q8NH50 307 aa16.92■□□□□ 0.3
HMGN1-210ENST00000464078 GBP4Q96PP9 640 aa16.92■□□□□ 0.3
HMGN1-210ENST00000464078 AKIRIN1Q9H9L7 192 aaPredicted RBP16.92■□□□□ 0.3
HMGN1-210ENST00000464078 UVRAGQ9P2Y5 699 aa16.92■□□□□ 0.3
HMGN1-210ENST00000464078 SPO11Q9Y5K1 396 aa16.92■□□□□ 0.3
HMGN1-210ENST00000464078 MBD3O95983 291 aa16.91■□□□□ 0.3
HMGN1-210ENST00000464078 LPOP22079 712 aaPredicted RBP16.91■□□□□ 0.3
HMGN1-210ENST00000464078 RPS18P62269 152 aaKnown RBP16.91■□□□□ 0.3
HMGN1-210ENST00000464078 TUBB4BP68371 445 aa16.91■□□□□ 0.3
HMGN1-210ENST00000464078 TUBB2AQ13885 445 aa16.91■□□□□ 0.3
HMGN1-210ENST00000464078 PDK1Q15118 436 aa16.91■□□□□ 0.3
HMGN1-210ENST00000464078 CHRNA6Q15825 494 aa16.91■□□□□ 0.3
HMGN1-210ENST00000464078 RPE65Q16518 533 aa16.91■□□□□ 0.3
HMGN1-210ENST00000464078 NADK2Q4G0N4 442 aa16.91■□□□□ 0.3
HMGN1-210ENST00000464078 SLC9A4Q6AI14 798 aa16.91■□□□□ 0.3
HMGN1-210ENST00000464078 HIST2H2BCQ6DN03 193 aa16.91■□□□□ 0.3
HMGN1-210ENST00000464078 FAM199XQ6PEV8 388 aaPredicted RBP16.91■□□□□ 0.3
HMGN1-210ENST00000464078 AMZ2Q86W34 360 aa16.91■□□□□ 0.3
HMGN1-210ENST00000464078 HPS6Q86YV9 775 aa16.91■□□□□ 0.3
HMGN1-210ENST00000464078 BRSK1Q8TDC3 778 aa16.91■□□□□ 0.3
HMGN1-210ENST00000464078 ADAMTS17Q8TE56 1095 aa16.91■□□□□ 0.3
HMGN1-210ENST00000464078 RAPGEF5Q92565 580 aa16.91■□□□□ 0.3
HMGN1-210ENST00000464078 LRFN5Q96NI6 719 aa16.91■□□□□ 0.3
HMGN1-210ENST00000464078 MAP3K3Q99759 626 aa16.91■□□□□ 0.3
HMGN1-210ENST00000464078 TUBB2BQ9BVA1 445 aa16.91■□□□□ 0.3
HMGN1-210ENST00000464078 CEP41Q9BYV8 373 aa16.91■□□□□ 0.3
HMGN1-210ENST00000464078 ZCCHC2Q9C0B9 1178 aaKnown RBP16.91■□□□□ 0.3
HMGN1-210ENST00000464078 ING2Q9H160 280 aa16.91■□□□□ 0.3
HMGN1-210ENST00000464078 CBX8Q9HC52 389 aa16.91■□□□□ 0.3
HMGN1-210ENST00000464078 ACSS2Q9NR19 701 aa16.91■□□□□ 0.3
HMGN1-210ENST00000464078 LATS2Q9NRM7 1088 aa16.91■□□□□ 0.3
HMGN1-210ENST00000464078 OR5K3A6NET4 321 aa16.9■□□□□ 0.3
HMGN1-210ENST00000464078 AURKAO14965 403 aa16.9■□□□□ 0.3
HMGN1-210ENST00000464078 SEMA7AO75326 666 aa16.9■□□□□ 0.3
HMGN1-210ENST00000464078 KDELR1P24390 212 aa16.9■□□□□ 0.3
HMGN1-210ENST00000464078 PBX1P40424 430 aa16.9■□□□□ 0.3
HMGN1-210ENST00000464078 ZBED6P86452 979 aa16.9■□□□□ 0.3
HMGN1-210ENST00000464078 PDE1BQ01064 536 aa16.9■□□□□ 0.3
HMGN1-210ENST00000464078 GPS2Q13227 327 aa16.9■□□□□ 0.3
HMGN1-210ENST00000464078 PCSK7Q16549 785 aa16.9■□□□□ 0.3
HMGN1-210ENST00000464078 DNTTIP2Q5QJE6 756 aaKnown RBP16.9■□□□□ 0.3
HMGN1-210ENST00000464078 ZDHHC20Q5W0Z9 365 aa16.9■□□□□ 0.3
HMGN1-210ENST00000464078 DDHD1Q8NEL9 900 aa16.9■□□□□ 0.3
HMGN1-210ENST00000464078 IQCDQ96DY2 449 aa16.9■□□□□ 0.3
HMGN1-210ENST00000464078 AGAP3Q96P47 875 aa16.9■□□□□ 0.3
HMGN1-210ENST00000464078 TRABDQ9H4I3 376 aa16.9■□□□□ 0.3
HMGN1-210ENST00000464078 CTTNBP2NLQ9P2B4 639 aa16.9■□□□□ 0.3
HMGN1-210ENST00000464078 TRIM10Q9UDY6 481 aa16.9■□□□□ 0.3
HMGN1-210ENST00000464078 ZNF451Q9Y4E5 1061 aa16.9■□□□□ 0.3
HMGN1-210ENST00000464078 HEY1Q9Y5J3 304 aa16.9■□□□□ 0.3
HMGN1-210ENST00000464078 DNMT3AQ9Y6K1 912 aaPredicted RBP16.9■□□□□ 0.3
HMGN1-210ENST00000464078 SSU72P8A0A1W2PR75 194 aa16.89■□□□□ 0.29
HMGN1-210ENST00000464078 ARGFXA6NJG6 315 aa16.89■□□□□ 0.29
HMGN1-210ENST00000464078 SCRG1O75711 98 aa16.89■□□□□ 0.29
HMGN1-210ENST00000464078 RNF224P0DH78 156 aa16.89■□□□□ 0.29
HMGN1-210ENST00000464078 PTGIRP43119 386 aa16.89■□□□□ 0.29
HMGN1-210ENST00000464078 ARL4DP49703 201 aa16.89■□□□□ 0.29
HMGN1-210ENST00000464078 AP1B1Q10567 949 aa16.89■□□□□ 0.29
HMGN1-210ENST00000464078 CHAF1BQ13112 559 aa16.89■□□□□ 0.29
HMGN1-210ENST00000464078 PLCL1Q15111 1095 aa16.89■□□□□ 0.29
HMGN1-210ENST00000464078 LDLRAP1Q5SW96 308 aa16.89■□□□□ 0.29
HMGN1-210ENST00000464078 CCDC70Q6NSX1 233 aa16.89■□□□□ 0.29
HMGN1-210ENST00000464078 CERS6Q6ZMG9 384 aa16.89■□□□□ 0.29
HMGN1-210ENST00000464078 SPATA22Q8NHS9 363 aa16.89■□□□□ 0.29
HMGN1-210ENST00000464078 GDAP1Q8TB36 358 aa16.89■□□□□ 0.29
HMGN1-210ENST00000464078 ZFPM2Q8WW38 1151 aa16.89■□□□□ 0.29
HMGN1-210ENST00000464078 ZNF501Q96CX3 271 aaPredicted RBP16.89■□□□□ 0.29
HMGN1-210ENST00000464078 TTC25Q96NG3 672 aa16.89■□□□□ 0.29
HMGN1-210ENST00000464078 IL26Q9NPH9 171 aa16.89■□□□□ 0.29
HMGN1-210ENST00000464078 FARSAQ9Y285 508 aaKnown RBP16.89■□□□□ 0.29
HMGN1-210ENST00000464078 BTRCQ9Y297 605 aa16.89■□□□□ 0.29
HMGN1-210ENST00000464078 TEP1Q99973 2627 aaKnown RBP16.89■□□□□ 0.29
HMGN1-210ENST00000464078 LRRD1A4D1F6 860 aa16.88■□□□□ 0.29
HMGN1-210ENST00000464078 C3orf70A6NLC5 250 aaPredicted RBP16.88■□□□□ 0.29
HMGN1-210ENST00000464078 PPP1R12AO14974 1030 aaPredicted RBP16.88■□□□□ 0.29
HMGN1-210ENST00000464078 DPM1O60762 260 aa16.88■□□□□ 0.29
HMGN1-210ENST00000464078 POP7O75817 140 aaKnown RBP16.88■□□□□ 0.29
HMGN1-210ENST00000464078 ZBTB11O95625 1053 aaPredicted RBP16.88■□□□□ 0.29
HMGN1-210ENST00000464078 DDAH2O95865 285 aa16.88■□□□□ 0.29
HMGN1-210ENST00000464078 MT-CYBP00156 380 aaPredicted RBP16.88■□□□□ 0.29
HMGN1-210ENST00000464078 RAB40ALP0C0E4 278 aa16.88■□□□□ 0.29
HMGN1-210ENST00000464078 MTHFD1P11586 935 aaKnown RBP16.88■□□□□ 0.29
HMGN1-210ENST00000464078 VARSP26640 1264 aaKnown RBP16.88■□□□□ 0.29
HMGN1-210ENST00000464078 CTSCP53634 463 aa16.88■□□□□ 0.29
HMGN1-210ENST00000464078 GSDMDP57764 484 aa16.88■□□□□ 0.29
HMGN1-210ENST00000464078 INPP5JQ15735 1006 aaPredicted RBP16.88■□□□□ 0.29
HMGN1-210ENST00000464078 JMJD6Q6NYC1 403 aaPredicted RBP16.88■□□□□ 0.29
HMGN1-210ENST00000464078 FAM83HQ6ZRV2 1179 aaPredicted RBP16.88■□□□□ 0.29
HMGN1-210ENST00000464078 TMEM126BQ8IUX1 230 aa16.88■□□□□ 0.29
HMGN1-210ENST00000464078 TTC30BQ8N4P2 665 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms