RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 RPS15P62841 145 aaKnown RBP20.3■□□□□ 0.84
CPSF7-209ENST00000463244 DMPKQ09013 629 aa20.3■□□□□ 0.84
CPSF7-209ENST00000463244 AP1B1Q10567 949 aa20.3■□□□□ 0.84
CPSF7-209ENST00000463244 CHAF1BQ13112 559 aa20.3■□□□□ 0.84
CPSF7-209ENST00000463244 GTF2H3Q13889 308 aa20.3■□□□□ 0.84
CPSF7-209ENST00000463244 NFKBIBQ15653 356 aa20.3■□□□□ 0.84
CPSF7-209ENST00000463244 KLHL35Q6PF15 583 aa20.3■□□□□ 0.84
CPSF7-209ENST00000463244 KMT5CQ86Y97 462 aa20.3■□□□□ 0.84
CPSF7-209ENST00000463244 AGAP3Q96P47 875 aa20.3■□□□□ 0.84
CPSF7-209ENST00000463244 GBP4Q96PP9 640 aa20.3■□□□□ 0.84
CPSF7-209ENST00000463244 SRPK1Q96SB4 655 aaKnown RBP20.3■□□□□ 0.84
CPSF7-209ENST00000463244 ING2Q9H160 280 aa20.3■□□□□ 0.84
CPSF7-209ENST00000463244 CBX8Q9HC52 389 aa20.3■□□□□ 0.84
CPSF7-209ENST00000463244 BPIFA1Q9NP55 256 aa20.3■□□□□ 0.84
CPSF7-209ENST00000463244 ACSS2Q9NR19 701 aa20.3■□□□□ 0.84
CPSF7-209ENST00000463244 CTTNBP2NLQ9P2B4 639 aa20.3■□□□□ 0.84
CPSF7-209ENST00000463244 HEY1Q9Y5J3 304 aa20.3■□□□□ 0.84
CPSF7-209ENST00000463244 SPO11Q9Y5K1 396 aa20.3■□□□□ 0.84
CPSF7-209ENST00000463244 ARGFXA6NJG6 315 aa20.29■□□□□ 0.84
CPSF7-209ENST00000463244 CPNE3O75131 537 aaKnown RBP20.29■□□□□ 0.84
CPSF7-209ENST00000463244 SEMA7AO75326 666 aa20.29■□□□□ 0.84
CPSF7-209ENST00000463244 RPE65Q16518 533 aa20.29■□□□□ 0.84
CPSF7-209ENST00000463244 ZFYVE27Q5T4F4 411 aa20.29■□□□□ 0.84
CPSF7-209ENST00000463244 ZNF517Q6ZMY9 492 aaPredicted RBP20.29■□□□□ 0.84
CPSF7-209ENST00000463244 AMZ2Q86W34 360 aa20.29■□□□□ 0.84
CPSF7-209ENST00000463244 D2HGDHQ8N465 521 aa20.29■□□□□ 0.84
CPSF7-209ENST00000463244 GDAP1Q8TB36 358 aa20.29■□□□□ 0.84
CPSF7-209ENST00000463244 BRSK1Q8TDC3 778 aa20.29■□□□□ 0.84
CPSF7-209ENST00000463244 CD180Q99467 661 aa20.29■□□□□ 0.84
CPSF7-209ENST00000463244 CUEDC1Q9NWM3 386 aaPredicted RBP20.29■□□□□ 0.84
CPSF7-209ENST00000463244 UVRAGQ9P2Y5 699 aa20.29■□□□□ 0.84
CPSF7-209ENST00000463244 NENFQ9UMX5 172 aa20.29■□□□□ 0.84
CPSF7-209ENST00000463244 TLCD2A6NGC4 264 aa20.28■□□□□ 0.84
CPSF7-209ENST00000463244 ZNF487B1APH4 448 aa20.28■□□□□ 0.84
CPSF7-209ENST00000463244 NDST3O95803 873 aa20.28■□□□□ 0.84
CPSF7-209ENST00000463244 MT-CYBP00156 380 aaPredicted RBP20.28■□□□□ 0.84
CPSF7-209ENST00000463244 SERPINC1P01008 464 aa20.28■□□□□ 0.84
CPSF7-209ENST00000463244 RNF224P0DH78 156 aa20.28■□□□□ 0.84
CPSF7-209ENST00000463244 LPOP22079 712 aaPredicted RBP20.28■□□□□ 0.84
CPSF7-209ENST00000463244 HMGCLP35914 325 aa20.28■□□□□ 0.84
CPSF7-209ENST00000463244 CCL11P51671 97 aa20.28■□□□□ 0.84
CPSF7-209ENST00000463244 TUBB4BP68371 445 aa20.28■□□□□ 0.84
CPSF7-209ENST00000463244 PDE1BQ01064 536 aa20.28■□□□□ 0.84
CPSF7-209ENST00000463244 TUBB2AQ13885 445 aa20.28■□□□□ 0.84
CPSF7-209ENST00000463244 PLCL1Q15111 1095 aa20.28■□□□□ 0.84
CPSF7-209ENST00000463244 DNTTIP2Q5QJE6 756 aaKnown RBP20.28■□□□□ 0.84
CPSF7-209ENST00000463244 SLC9A4Q6AI14 798 aa20.28■□□□□ 0.84
CPSF7-209ENST00000463244 SPATA22Q8NHS9 363 aa20.28■□□□□ 0.84
CPSF7-209ENST00000463244 TTC25Q96NG3 672 aa20.28■□□□□ 0.84
CPSF7-209ENST00000463244 OLFM3Q96PB7 478 aa20.28■□□□□ 0.84
CPSF7-209ENST00000463244 TUBB2BQ9BVA1 445 aa20.28■□□□□ 0.84
CPSF7-209ENST00000463244 PSMD13Q9UNM6 376 aa20.28■□□□□ 0.84
CPSF7-209ENST00000463244 FARSAQ9Y285 508 aaKnown RBP20.28■□□□□ 0.84
CPSF7-209ENST00000463244 OR5K3A6NET4 321 aa20.27■□□□□ 0.84
CPSF7-209ENST00000463244 SCRG1O75711 98 aa20.27■□□□□ 0.84
CPSF7-209ENST00000463244 PBX1P40424 430 aa20.27■□□□□ 0.84
CPSF7-209ENST00000463244 ARL4DP49703 201 aa20.27■□□□□ 0.84
CPSF7-209ENST00000463244 CTSCP53634 463 aa20.27■□□□□ 0.84
CPSF7-209ENST00000463244 HSD11B2P80365 405 aa20.27■□□□□ 0.84
CPSF7-209ENST00000463244 ZBED6P86452 979 aa20.27■□□□□ 0.84
CPSF7-209ENST00000463244 GPS2Q13227 327 aa20.27■□□□□ 0.84
CPSF7-209ENST00000463244 PDK1Q15118 436 aa20.27■□□□□ 0.84
CPSF7-209ENST00000463244 CHRNA6Q15825 494 aa20.27■□□□□ 0.84
CPSF7-209ENST00000463244 IZUMO3Q5VZ72 239 aa20.27■□□□□ 0.84
CPSF7-209ENST00000463244 CCDC70Q6NSX1 233 aa20.27■□□□□ 0.84
CPSF7-209ENST00000463244 FAM83HQ6ZRV2 1179 aaPredicted RBP20.27■□□□□ 0.84
CPSF7-209ENST00000463244 DTX3LQ8TDB6 740 aa20.27■□□□□ 0.84
CPSF7-209ENST00000463244 ADAMTS17Q8TE56 1095 aa20.27■□□□□ 0.84
CPSF7-209ENST00000463244 MR1Q95460 341 aa20.27■□□□□ 0.84
CPSF7-209ENST00000463244 IL26Q9NPH9 171 aa20.27■□□□□ 0.84
CPSF7-209ENST00000463244 LCMT1Q9UIC8 334 aa20.27■□□□□ 0.84
CPSF7-209ENST00000463244 PCDHGB7Q9Y5F8 929 aa20.27■□□□□ 0.84
CPSF7-209ENST00000463244 UBA6A0AVT1 1052 aaPredicted RBP20.26■□□□□ 0.83
CPSF7-209ENST00000463244 LRRD1A4D1F6 860 aa20.26■□□□□ 0.83
CPSF7-209ENST00000463244 POP7O75817 140 aaKnown RBP20.26■□□□□ 0.83
CPSF7-209ENST00000463244 CEACAM4O75871 244 aa20.26■□□□□ 0.83
CPSF7-209ENST00000463244 MBD3O95983 291 aa20.26■□□□□ 0.83
CPSF7-209ENST00000463244 PTGIRP43119 386 aa20.26■□□□□ 0.83
CPSF7-209ENST00000463244 VSIG1Q86XK7 387 aa20.26■□□□□ 0.83
CPSF7-209ENST00000463244 TMEM126BQ8IUX1 230 aa20.26■□□□□ 0.83
CPSF7-209ENST00000463244 RASGEF1AQ8N9B8 481 aa20.26■□□□□ 0.83
CPSF7-209ENST00000463244 SLC38A9Q8NBW4 561 aa20.26■□□□□ 0.83
CPSF7-209ENST00000463244 OR8K5Q8NH50 307 aa20.26■□□□□ 0.83
CPSF7-209ENST00000463244 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.26■□□□□ 0.83
CPSF7-209ENST00000463244 ZNF501Q96CX3 271 aaPredicted RBP20.26■□□□□ 0.83
CPSF7-209ENST00000463244 ZCCHC2Q9C0B9 1178 aaKnown RBP20.26■□□□□ 0.83
CPSF7-209ENST00000463244 GLOD4Q9HC38 313 aa20.26■□□□□ 0.83
CPSF7-209ENST00000463244 KCND1Q9NSA2 647 aa20.26■□□□□ 0.83
CPSF7-209ENST00000463244 HRASLS2Q9NWW9 162 aa20.26■□□□□ 0.83
CPSF7-209ENST00000463244 TMEM63CQ9P1W3 806 aa20.26■□□□□ 0.83
CPSF7-209ENST00000463244 ZNF451Q9Y4E5 1061 aa20.26■□□□□ 0.83
CPSF7-209ENST00000463244 ABCA12Q86UK0 2595 aa20.26■□□□□ 0.83
CPSF7-209ENST00000463244 CSMD1Q96PZ7 3565 aa20.25■□□□□ 0.83
CPSF7-209ENST00000463244 C3orf70A6NLC5 250 aaPredicted RBP20.25■□□□□ 0.83
CPSF7-209ENST00000463244 GOLGA6L22H0YM25 854 aa20.25■□□□□ 0.83
CPSF7-209ENST00000463244 PPP1R12AO14974 1030 aaPredicted RBP20.25■□□□□ 0.83
CPSF7-209ENST00000463244 PMPCBO75439 489 aa20.25■□□□□ 0.83
CPSF7-209ENST00000463244 H2AFZP0C0S5 128 aa20.25■□□□□ 0.83
CPSF7-209ENST00000463244 MTHFD1P11586 935 aaKnown RBP20.25■□□□□ 0.83
CPSF7-209ENST00000463244 NFE2L1Q14494 772 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms