RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 COLEC12Q5KU26 742 aa18.1■□□□□ 0.49
COL9A2-205ENST00000461118 GPRC6AQ5T6X5 926 aa18.1■□□□□ 0.49
COL9A2-205ENST00000461118 ATG14Q6ZNE5 492 aa18.1■□□□□ 0.49
COL9A2-205ENST00000461118 C11orf96Q7Z7L8 435 aa18.1■□□□□ 0.49
COL9A2-205ENST00000461118 USP7Q93009 1102 aa18.1■□□□□ 0.49
COL9A2-205ENST00000461118 TMEM159Q96B96 161 aa18.1■□□□□ 0.49
COL9A2-205ENST00000461118 SARS2Q9NP81 518 aaKnown RBP18.1■□□□□ 0.49
COL9A2-205ENST00000461118 JRKLQ9Y4A0 524 aa18.1■□□□□ 0.49
COL9A2-205ENST00000461118 DNMT3AQ9Y6K1 912 aaPredicted RBP18.1■□□□□ 0.49
COL9A2-205ENST00000461118 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.09■□□□□ 0.49
COL9A2-205ENST00000461118 GPR39O43194 453 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 SRP72O76094 671 aaKnown RBP18.09■□□□□ 0.49
COL9A2-205ENST00000461118 SUN1O94901 812 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 PRAMEF1O95521 474 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 CPNE6O95741 557 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 IFNB1P01574 187 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 PSMA3P25788 255 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 CD1CP29017 333 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 NFATC2Q13469 925 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 SNX1Q13596 522 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 GTF2H3Q13889 308 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 CLCA4Q14CN2 919 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 C16orf72Q14CZ0 275 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 CRTC3Q6UUV7 619 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 WASH2PQ6VEQ5 465 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 PIM3Q86V86 326 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 REXO1L1PQ8IX06 675 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 RASGEF1AQ8N9B8 481 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 OR13C4Q8NGS5 318 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 ARHGAP9Q9BRR9 750 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 SEMA6CQ9H3T2 930 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 ASB8Q9H765 288 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 ETNK1Q9HBU6 452 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 WASH6PQ9NQA3 447 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 HOMER3Q9NSC5 361 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 FKBPLQ9UIM3 349 aa18.09■□□□□ 0.49
COL9A2-205ENST00000461118 TRBV23OR9-2A0A075B6M9 112 aa18.08■□□□□ 0.48
COL9A2-205ENST00000461118 IGHV1OR21-1A0A087WYE8 117 aa18.08■□□□□ 0.48
COL9A2-205ENST00000461118 H7C0S8 307 aa18.08■□□□□ 0.48
COL9A2-205ENST00000461118 CEP104O60308 925 aa18.08■□□□□ 0.48
COL9A2-205ENST00000461118 TPH1P17752 444 aa18.08■□□□□ 0.48
COL9A2-205ENST00000461118 XRCC1P18887 633 aaPredicted RBP18.08■□□□□ 0.48
COL9A2-205ENST00000461118 GPLD1P80108 840 aa18.08■□□□□ 0.48
COL9A2-205ENST00000461118 SEMA5AQ13591 1074 aa18.08■□□□□ 0.48
COL9A2-205ENST00000461118 INSCQ1MX18 579 aa18.08■□□□□ 0.48
COL9A2-205ENST00000461118 MANEAQ5SRI9 462 aa18.08■□□□□ 0.48
COL9A2-205ENST00000461118 ABRAXAS1Q6UWZ7 409 aa18.08■□□□□ 0.48
COL9A2-205ENST00000461118 SLC9B2Q86UD5 537 aa18.08■□□□□ 0.48
COL9A2-205ENST00000461118 AVL9Q8NBF6 648 aa18.08■□□□□ 0.48
COL9A2-205ENST00000461118 SH3KBP1Q96B97 665 aa18.08■□□□□ 0.48
COL9A2-205ENST00000461118 PDLIM2Q96JY6 352 aa18.08■□□□□ 0.48
COL9A2-205ENST00000461118 ZNF514Q96K75 400 aaPredicted RBP18.08■□□□□ 0.48
COL9A2-205ENST00000461118 PRDM8Q9NQV8 689 aa18.08■□□□□ 0.48
COL9A2-205ENST00000461118 NLE1Q9NVX2 485 aaPredicted RBP18.08■□□□□ 0.48
COL9A2-205ENST00000461118 PAK5Q9P286 719 aa18.08■□□□□ 0.48
COL9A2-205ENST00000461118 MROH6A6NGR9 719 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 ZSCAN12O43309 604 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 SNX2O60749 519 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 VCLP18206 1134 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 IDSP22304 550 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 CXCR5P32302 372 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 HHEXQ03014 270 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 DMPKQ09013 629 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 CDH17Q12864 832 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 LONRF2Q1L5Z9 754 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 AMZ1Q400G9 498 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 GPR33Q49SQ1 333 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 AGAP9Q5VTM2 703 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 C4orf22Q6V702 233 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 ZNF574Q6ZN55 896 aaPredicted RBP18.07■□□□□ 0.48
COL9A2-205ENST00000461118 SNX20Q7Z614 316 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 TRAPPC5Q8IUR0 188 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 TAB3Q8N5C8 712 aaPredicted RBP18.07■□□□□ 0.48
COL9A2-205ENST00000461118 CCDC89Q8N998 374 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 GLIS1Q8NBF1 620 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 CMKLR1Q99788 373 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 DPYSL5Q9BPU6 564 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 SLC12A9Q9BXP2 914 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 B3GNT4Q9C0J1 378 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 KCNF1Q9H3M0 494 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 STN1Q9H668 368 aaKnown RBP18.07■□□□□ 0.48
COL9A2-205ENST00000461118 RAB6BQ9NRW1 208 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 KCNK4Q9NYG8 393 aa18.07■□□□□ 0.48
COL9A2-205ENST00000461118 SFTPCP11686 197 aa18.06■□□□□ 0.48
COL9A2-205ENST00000461118 CCL4P13236 92 aa18.06■□□□□ 0.48
COL9A2-205ENST00000461118 ETS1P14921 441 aa18.06■□□□□ 0.48
COL9A2-205ENST00000461118 RPL22P35268 128 aaKnown RBP18.06■□□□□ 0.48
COL9A2-205ENST00000461118 CTSCP53634 463 aa18.06■□□□□ 0.48
COL9A2-205ENST00000461118 MAPK10P53779 464 aa18.06■□□□□ 0.48
COL9A2-205ENST00000461118 UBE2IP63279 158 aaKnown RBP18.06■□□□□ 0.48
COL9A2-205ENST00000461118 POU6F1Q14863 301 aa18.06■□□□□ 0.48
COL9A2-205ENST00000461118 PLA2G4EQ3MJ16 856 aa18.06■□□□□ 0.48
COL9A2-205ENST00000461118 TMEM220Q6QAJ8 160 aa18.06■□□□□ 0.48
COL9A2-205ENST00000461118 PRUNE1Q86TP1 453 aa18.06■□□□□ 0.48
COL9A2-205ENST00000461118 AMZ2Q86W34 360 aa18.06■□□□□ 0.48
COL9A2-205ENST00000461118 RASGEF1CQ8N431 466 aa18.06■□□□□ 0.48
COL9A2-205ENST00000461118 OR52K1Q8NGK4 314 aa18.06■□□□□ 0.48
COL9A2-205ENST00000461118 STYXQ8WUJ0 223 aa18.06■□□□□ 0.48
COL9A2-205ENST00000461118 ANP32BQ92688 251 aaKnown RBP18.06■□□□□ 0.48
COL9A2-205ENST00000461118 PMEPA1Q969W9 287 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms