RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 GORASP1Q9BQQ3 440 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 TSGA10Q9BZW7 698 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 FAM117AQ9C073 453 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 ZMYND15Q9H091 742 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 BPIFA1Q9NP55 256 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 DUSP10Q9Y6W6 482 aa9.83□□□□□ -0.84
HDLBP-228ENST00000459788 TRBV23OR9-2A0A075B6M9 112 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 GOLGA6L3A6NEY3 463 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 MGAT4DA6NG13 374 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 EFCAB7A8K855 629 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 CFAP99D6REC4 459 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 SRP72O76094 671 aaKnown RBP9.82□□□□□ -0.84
HDLBP-228ENST00000459788 PRAMEF1O95521 474 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 AGTP01019 485 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 PTMAP06454 111 aaKnown RBP9.82□□□□□ -0.84
HDLBP-228ENST00000459788 BRAFP15056 766 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 MSH3P20585 1137 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 PSMB4P28070 264 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 NDUFS1P28331 727 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 UGT1A3P35503 534 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 GSDMDP57764 484 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 ABHD18Q0P651 414 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 LAMB3Q13751 1172 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 LLGL1Q15334 1064 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 KHDC1Q4VXA5 237 aaKnown RBP9.82□□□□□ -0.84
HDLBP-228ENST00000459788 KCTD11Q693B1 232 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 TMEM220Q6QAJ8 160 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 CRTC3Q6UUV7 619 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 FAM151BQ6UXP7 276 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 ARHGEF18Q6ZSZ5 1173 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 SNX20Q7Z614 316 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 LINC00523Q86TU6 105 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 ZFAND4Q86XD8 727 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 KMT5CQ86Y97 462 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 ZNF843Q8N446 348 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 RASGEF1AQ8N9B8 481 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 OR2L2Q8NH16 312 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 SLC35B2Q8TB61 432 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 KLHL6Q8WZ60 621 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 UBXN4Q92575 508 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 CATSPER2Q96P56 530 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 TBL1YQ9BQ87 522 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 CCM2Q9BSQ5 444 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 FICDQ9BVA6 458 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 ADNPQ9H2P0 1102 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 ZNF768Q9H5H4 540 aaKnown RBP9.82□□□□□ -0.84
HDLBP-228ENST00000459788 LRRC40Q9H9A6 602 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 OCIAD1Q9NX40 245 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 SIDT1Q9NXL6 827 aaKnown RBP9.82□□□□□ -0.84
HDLBP-228ENST00000459788 TMEM9Q9P0T7 183 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 SCHIP1Q9P0W5 487 aaPredicted RBP9.82□□□□□ -0.84
HDLBP-228ENST00000459788 PILRAQ9UKJ1 303 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 TFR2Q9UP52 801 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 PCDHGA4Q9Y5G9 962 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 HEBP2Q9Y5Z4 205 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 B3GALT1Q9Y5Z6 326 aa9.82□□□□□ -0.84
HDLBP-228ENST00000459788 IGLV3-16A0A075B6K0 115 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 MACROD2A1Z1Q3 448 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 MATN2O00339 956 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 QSOX1O00391 747 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 POLR1CO15160 346 aaPredicted RBP9.81□□□□□ -0.84
HDLBP-228ENST00000459788 DDX3YO15523 660 aaKnown RBP9.81□□□□□ -0.84
HDLBP-228ENST00000459788 KRT86O43790 486 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 POP7O75817 140 aaKnown RBP9.81□□□□□ -0.84
HDLBP-228ENST00000459788 C1QL1O75973 258 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 RECKO95980 971 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 AMD1P17707 334 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 ITGALP20701 1170 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 PPM1FP49593 454 aaPredicted RBP9.81□□□□□ -0.84
HDLBP-228ENST00000459788 ARSDP51689 593 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 ZNF140P52738 457 aaPredicted RBP9.81□□□□□ -0.84
HDLBP-228ENST00000459788 XIAPP98170 497 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 MC1RQ01726 317 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 TGIF1Q15583 401 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 ZNF648Q5T619 568 aaPredicted RBP9.81□□□□□ -0.84
HDLBP-228ENST00000459788 DENND5AQ6IQ26 1287 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 ZNF662Q6ZS27 426 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 ZNF761Q86XN6 746 aaPredicted RBP9.81□□□□□ -0.84
HDLBP-228ENST00000459788 FAM129CQ86XR2 697 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 CACNA2D3Q8IZS8 1091 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 NLGN4XQ8N0W4 816 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 NXPE1Q8N323 547 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 ESX1Q8N693 406 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 IL22RA1Q8N6P7 574 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 ACRBPQ8NEB7 543 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 NLGN4YQ8NFZ3 816 aaPredicted RBP9.81□□□□□ -0.84
HDLBP-228ENST00000459788 OR4K2Q8NGD2 314 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 PEX13Q92968 403 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 KIAA1143Q96AT1 154 aaPredicted RBP9.81□□□□□ -0.84
HDLBP-228ENST00000459788 DCUN1D1Q96GG9 259 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 SLC45A3Q96JT2 553 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 TBC1D10AQ9BXI6 508 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 ASB8Q9H765 288 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 VPS37BQ9H9H4 285 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 ARFGAP3Q9NP61 516 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 OGFRQ9NZT2 677 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 TUBD1Q9UJT1 453 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 RIMKLBQ9ULI2 386 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 DNAJC16Q9Y2G8 782 aa9.81□□□□□ -0.84
HDLBP-228ENST00000459788 ARL5AQ9Y689 179 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms