RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 CYP1A2P05177 515 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PYGLP06737 847 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CTSBP07858 339 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CCDC172P0C7W6 258 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 MYBL1P10243 752 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TNNT1P13805 278 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 UGT1A6P19224 532 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 UGT1A1P22309 533 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 UGT1A4P22310 534 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CA4P22748 312 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PTPN4P29074 926 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PRKCIP41743 596 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 LMAN1P49257 510 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 KPNA2P52292 529 aaKnown RBP5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ZNF135P52742 658 aaPredicted RBP5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ITGA1P56199 1179 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 DCDC1P59894 354 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 AP1B1Q10567 949 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 OLIG2Q13516 323 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PIGHQ14442 188 aaPredicted RBP5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 IL11RAQ14626 422 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 NFKBIBQ15653 356 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 INPP5JQ15735 1006 aaPredicted RBP5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CHRNA6Q15825 494 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 RPE65Q16518 533 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 IFI16Q16666 785 aaKnown RBP5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 UGT8Q16880 541 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 DEFB110Q30KQ9 67 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 BOLA3Q53S33 107 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TIGD7Q6NT04 549 aaPredicted RBP5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 JMJD6Q6NYC1 403 aaPredicted RBP5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 DAAM2Q86T65 1068 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TRIM73Q86UV7 250 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 NDUFAF2Q8N183 169 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SLC25A41Q8N5S1 370 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TRAM1L1Q8N609 369 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 RASGEF1AQ8N9B8 481 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 KCTD6Q8NC69 237 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 GALNT11Q8NCW6 608 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CCHCR1Q8TD31 782 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 KLHL6Q8WZ60 621 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 HAUS1Q96CS2 278 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 FAF2Q96CS3 445 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 HDAC11Q96DB2 347 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TRIM11Q96F44 468 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SLC41A2Q96JW4 573 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ZNF514Q96K75 400 aaPredicted RBP5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 RMDN2Q96LZ7 410 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ZNF670Q9BS34 389 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TIMM29Q9BSF4 260 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ZSCAN5AQ9BUG6 496 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 WWP1Q9H0M0 922 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ISCUQ9H1K1 167 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 GOLPH3Q9H4A6 298 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 EPB41L1Q9H4G0 881 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 RMI1Q9H9A7 625 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 UGT1A7Q9HAW7 530 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 UGT1A10Q9HAW8 530 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 UGT1A8Q9HAW9 530 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CBX8Q9HC52 389 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 MRPL47Q9HD33 250 aaKnown RBP5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ACSS2Q9NR19 701 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 AIPL1Q9NZN9 384 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SAE1Q9UBE0 346 aaPredicted RBP5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 IP6K2Q9UHH9 426 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 RARRES3Q9UL19 164 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 DNPEPQ9ULA0 475 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PADI1Q9ULC6 663 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 MYO6Q9UM54 1294 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 SNX7Q9UNH6 387 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 MAP4K5Q9Y4K4 846 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PCDHGA6Q9Y5G7 932 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CSAG2Q9Y5P2 127 aa5.86□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ITPR3Q14573 2671 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 A0A1B0GTH6 734 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 OR6C74A6NCV1 312 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 OR5K3A6NET4 321 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 GOLGA6L3A6NEY3 463 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 TLCD2A6NGC4 264 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 C21orf140B9A014 251 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 GAPDHSO14556 408 aaPredicted RBP5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 KMOO15229 486 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CPNE3O75131 537 aaKnown RBP5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CCNYL3P0C7X3 344 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 MTHFD1P11586 935 aaKnown RBP5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 GZMAP12544 262 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 PECAM1P16284 738 aaPredicted RBP5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 XRCC1P18887 633 aaPredicted RBP5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 POLR2CP19387 275 aaPredicted RBP5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 NFKB1P19838 968 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 HLA-DPA1P20036 260 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 IDSP22304 550 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 FECHP22830 423 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 AKT1P31749 480 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 OTX2P32243 289 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 ARL4DP49703 201 aa5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 RPL26P61254 145 aaKnown RBP5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 IFI35P80217 286 aaPredicted RBP5.85□□□□□ -1.47
HLA-DPA3-207ENST00000454398 CDK18Q07002 472 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms