RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 CRTC3Q6UUV7 619 aa11.44□□□□□ -0.58
HERC3-207ENST00000452979 ZNF517Q6ZMY9 492 aaPredicted RBP11.44□□□□□ -0.58
HERC3-207ENST00000452979 SYVN1Q86TM6 617 aa11.44□□□□□ -0.58
HERC3-207ENST00000452979 MAP7D3Q8IWC1 876 aa11.44□□□□□ -0.58
HERC3-207ENST00000452979 KCTD6Q8NC69 237 aa11.44□□□□□ -0.58
HERC3-207ENST00000452979 SSC4DQ8WTU2 575 aa11.44□□□□□ -0.58
HERC3-207ENST00000452979 LRRN4Q8WUT4 740 aa11.44□□□□□ -0.58
HERC3-207ENST00000452979 TADA1Q96BN2 335 aa11.44□□□□□ -0.58
HERC3-207ENST00000452979 IMP4Q96G21 291 aaKnown RBP11.44□□□□□ -0.58
HERC3-207ENST00000452979 AKIRIN1Q9H9L7 192 aaPredicted RBP11.44□□□□□ -0.58
HERC3-207ENST00000452979 RARRES3Q9UL19 164 aa11.44□□□□□ -0.58
HERC3-207ENST00000452979 TMPRSS11EQ9UL52 423 aa11.44□□□□□ -0.58
HERC3-207ENST00000452979 DNAJC16Q9Y2G8 782 aa11.44□□□□□ -0.58
HERC3-207ENST00000452979 WDR37Q9Y2I8 494 aa11.44□□□□□ -0.58
HERC3-207ENST00000452979 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.44□□□□□ -0.58
HERC3-207ENST00000452979 SHANK1Q9Y566 2161 aa11.44□□□□□ -0.58
HERC3-207ENST00000452979 IGHV5-51A0A0C4DH38 117 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 KCNK1O00180 336 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 SEMA7AO75326 666 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 CEACAM4O75871 244 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 FOLR1P15328 257 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 BPIP17213 487 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 LPOP22079 712 aaPredicted RBP11.43□□□□□ -0.58
HERC3-207ENST00000452979 SSR1P43307 286 aaKnown RBP11.43□□□□□ -0.58
HERC3-207ENST00000452979 PGDP52209 483 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 DRG2P55039 364 aaKnown RBP11.43□□□□□ -0.58
HERC3-207ENST00000452979 RPS15P62841 145 aaKnown RBP11.43□□□□□ -0.58
HERC3-207ENST00000452979 ACY1Q03154 408 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 DMPKQ09013 629 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 TMEM115Q12893 351 aaPredicted RBP11.43□□□□□ -0.58
HERC3-207ENST00000452979 TUBB3Q13509 450 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 PLA2G4EQ3MJ16 856 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 NADK2Q4G0N4 442 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 KHDC1Q4VXA5 237 aaKnown RBP11.43□□□□□ -0.58
HERC3-207ENST00000452979 ALS2CLQ60I27 953 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 IRGCQ6NXR0 463 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 FAM199XQ6PEV8 388 aaPredicted RBP11.43□□□□□ -0.58
HERC3-207ENST00000452979 KMT5CQ86Y97 462 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 SIDT2Q8NBJ9 832 aaKnown RBP11.43□□□□□ -0.58
HERC3-207ENST00000452979 CCNYQ8ND76 341 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 DTX3LQ8TDB6 740 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 CXorf40BQ96DE9 158 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 SRPK1Q96SB4 655 aaKnown RBP11.43□□□□□ -0.58
HERC3-207ENST00000452979 RUFY1Q96T51 708 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 SLC25A23Q9BV35 468 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 PYCARDQ9ULZ3 195 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 SHOC2Q9UQ13 582 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 ZNF711Q9Y462 761 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 PCDHGB7Q9Y5F8 929 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 PCDHA13Q9Y5I0 950 aa11.43□□□□□ -0.58
HERC3-207ENST00000452979 MTX2O75431 263 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 PROSCO94903 275 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 H2AFZP0C0S5 128 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 TMEM253P0C7T8 217 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 VCLP18206 1134 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 HALP42357 657 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 TAS2R40P59535 323 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 PPP1CAP62136 330 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 CDK18Q07002 472 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 ZBTB17Q13105 803 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 KCNAB1Q14722 419 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 SPA17Q15506 151 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 SLC14A2Q15849 920 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 IZUMO3Q5VZ72 239 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 KLHL35Q6PF15 583 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 H2AFVQ71UI9 128 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 NT5DC3Q86UY8 548 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 CPNE8Q86YQ8 564 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 D2HGDHQ8N465 521 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 BRSK1Q8TDC3 778 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 ZNF514Q96K75 400 aaPredicted RBP11.42□□□□□ -0.58
HERC3-207ENST00000452979 LRFN5Q96NI6 719 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 RNF157Q96PX1 679 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 CD180Q99467 661 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 GPR63Q9BZJ6 419 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 LACRTQ9GZZ8 138 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 ING2Q9H160 280 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 SLC25A51Q9H1U9 297 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 FARSAQ9Y285 508 aaKnown RBP11.42□□□□□ -0.58
HERC3-207ENST00000452979 UNC79Q9P2D8 2635 aa11.42□□□□□ -0.58
HERC3-207ENST00000452979 SPTAN1Q13813 2472 aaKnown RBP11.42□□□□□ -0.58
HERC3-207ENST00000452979 WIPF3A6NGB9 483 aa11.41□□□□□ -0.58
HERC3-207ENST00000452979 ZNF487B1APH4 448 aa11.41□□□□□ -0.58
HERC3-207ENST00000452979 DDAH2O95865 285 aa11.41□□□□□ -0.58
HERC3-207ENST00000452979 PIRTP0C851 137 aa11.41□□□□□ -0.58
HERC3-207ENST00000452979 EBLN1P0CF75 366 aa11.41□□□□□ -0.58
HERC3-207ENST00000452979 KDELR1P24390 212 aa11.41□□□□□ -0.58
HERC3-207ENST00000452979 HMGCLP35914 325 aa11.41□□□□□ -0.58
HERC3-207ENST00000452979 MAGEA1P43355 309 aa11.41□□□□□ -0.58
HERC3-207ENST00000452979 CCL11P51671 97 aa11.41□□□□□ -0.58
HERC3-207ENST00000452979 VAV2P52735 878 aa11.41□□□□□ -0.58
HERC3-207ENST00000452979 RPS18P62269 152 aaKnown RBP11.41□□□□□ -0.58
HERC3-207ENST00000452979 HSD11B2P80365 405 aa11.41□□□□□ -0.58
HERC3-207ENST00000452979 PDE1BQ01064 536 aa11.41□□□□□ -0.58
HERC3-207ENST00000452979 IL10RAQ13651 578 aa11.41□□□□□ -0.58
HERC3-207ENST00000452979 RPE65Q16518 533 aa11.41□□□□□ -0.58
HERC3-207ENST00000452979 ATP13A5Q4VNC0 1218 aa11.41□□□□□ -0.58
HERC3-207ENST00000452979 CPZQ66K79 652 aa11.41□□□□□ -0.58
HERC3-207ENST00000452979 AMZ2Q86W34 360 aa11.41□□□□□ -0.58
HERC3-207ENST00000452979 HPS6Q86YV9 775 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms