RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 RPE65Q16518 533 aa15.22■□□□□ 0.03
TRA2A-203ENST00000448549 SIRPB2Q5JXA9 342 aa15.22■□□□□ 0.03
TRA2A-203ENST00000448549 PWWP2BQ6NUJ5 590 aa15.22■□□□□ 0.03
TRA2A-203ENST00000448549 KDELC1Q6UW63 502 aa15.22■□□□□ 0.03
TRA2A-203ENST00000448549 FAM151BQ6UXP7 276 aa15.22■□□□□ 0.03
TRA2A-203ENST00000448549 FAM83HQ6ZRV2 1179 aaPredicted RBP15.22■□□□□ 0.03
TRA2A-203ENST00000448549 RHOT2Q8IXI1 618 aa15.22■□□□□ 0.03
TRA2A-203ENST00000448549 RHOT1Q8IXI2 618 aa15.22■□□□□ 0.03
TRA2A-203ENST00000448549 GPR150Q8NGU9 434 aa15.22■□□□□ 0.03
TRA2A-203ENST00000448549 CT55Q8WUE5 264 aa15.22■□□□□ 0.03
TRA2A-203ENST00000448549 TFB1MQ8WVM0 346 aaKnown RBP15.22■□□□□ 0.03
TRA2A-203ENST00000448549 CHP1Q99653 195 aa15.22■□□□□ 0.03
TRA2A-203ENST00000448549 TRABDQ9H4I3 376 aa15.22■□□□□ 0.03
TRA2A-203ENST00000448549 PDE7BQ9NP56 450 aa15.22■□□□□ 0.03
TRA2A-203ENST00000448549 LHX9Q9NQ69 397 aa15.22■□□□□ 0.03
TRA2A-203ENST00000448549 DDX56Q9NY93 547 aaKnown RBP15.22■□□□□ 0.03
TRA2A-203ENST00000448549 BUD23O43709 281 aaKnown RBP15.21■□□□□ 0.03
TRA2A-203ENST00000448549 MT-ND3P03897 115 aa15.21■□□□□ 0.03
TRA2A-203ENST00000448549 PECAM1P16284 738 aaPredicted RBP15.21■□□□□ 0.03
TRA2A-203ENST00000448549 SPAM1P38567 509 aa15.21■□□□□ 0.03
TRA2A-203ENST00000448549 CDKN2BP42772 138 aa15.21■□□□□ 0.03
TRA2A-203ENST00000448549 NR2C2P49116 596 aa15.21■□□□□ 0.03
TRA2A-203ENST00000448549 DMPKQ09013 629 aa15.21■□□□□ 0.03
TRA2A-203ENST00000448549 TUBB3Q13509 450 aa15.21■□□□□ 0.03
TRA2A-203ENST00000448549 PPP2R5EQ16537 467 aa15.21■□□□□ 0.03
TRA2A-203ENST00000448549 ZDHHC20Q5W0Z9 365 aa15.21■□□□□ 0.03
TRA2A-203ENST00000448549 TCTN3Q6NUS6 607 aa15.21■□□□□ 0.03
TRA2A-203ENST00000448549 TMEM220Q6QAJ8 160 aa15.21■□□□□ 0.03
TRA2A-203ENST00000448549 CERS6Q6ZMG9 384 aa15.21■□□□□ 0.03
TRA2A-203ENST00000448549 ASB18Q6ZVZ8 466 aa15.21■□□□□ 0.03
TRA2A-203ENST00000448549 BZW1Q7L1Q6 419 aaKnown RBP15.21■□□□□ 0.03
TRA2A-203ENST00000448549 TEX19Q8NA77 164 aa15.21■□□□□ 0.03
TRA2A-203ENST00000448549 SIDT2Q8NBJ9 832 aaKnown RBP15.21■□□□□ 0.03
TRA2A-203ENST00000448549 DTX3LQ8TDB6 740 aa15.21■□□□□ 0.03
TRA2A-203ENST00000448549 UBXN4Q92575 508 aa15.21■□□□□ 0.03
TRA2A-203ENST00000448549 SLC41A2Q96JW4 573 aa15.21■□□□□ 0.03
TRA2A-203ENST00000448549 CCDC42Q96M95 316 aa15.21■□□□□ 0.03
TRA2A-203ENST00000448549 AKIRIN1Q9H9L7 192 aaPredicted RBP15.21■□□□□ 0.03
TRA2A-203ENST00000448549 IL17CQ9P0M4 197 aa15.21■□□□□ 0.03
TRA2A-203ENST00000448549 SEMA5BQ9P283 1151 aa15.21■□□□□ 0.03
TRA2A-203ENST00000448549 TLK1Q9UKI8 766 aa15.21■□□□□ 0.03
TRA2A-203ENST00000448549 RARRES3Q9UL19 164 aa15.21■□□□□ 0.03
TRA2A-203ENST00000448549 PCDHGA6Q9Y5G7 932 aa15.21■□□□□ 0.03
TRA2A-203ENST00000448549 GLYATL1P3A0A0U1RQE8 302 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 CLEC18AA5D8T8 446 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 OR2AG2A6NM03 316 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 MTSS1O43312 755 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 CST8O60676 142 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 RFPL1O75677 317 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 EPOP01588 193 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 NTRK1P04629 796 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 EBLN1P0CF75 366 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 COMTP21964 271 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 SLC1A1P43005 524 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 TNNT3P45378 269 aaPredicted RBP15.2■□□□□ 0.02
TRA2A-203ENST00000448549 MLLT10P55197 1068 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 ADCY2Q08462 1091 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 TFDP2Q14188 446 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 NFE2L1Q14494 772 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 PLCL1Q15111 1095 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 LDLRAP1Q5SW96 308 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 GPRC6AQ5T6X5 926 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 KAZNQ674X7 775 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 CYB5D1Q6P9G0 228 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 FAM199XQ6PEV8 388 aaPredicted RBP15.2■□□□□ 0.02
TRA2A-203ENST00000448549 KLHL35Q6PF15 583 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 CLEC18BQ6UXF7 455 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 CLEC18CQ8NCF0 446 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 DDHD1Q8NEL9 900 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 BLOC1S5Q8TDH9 187 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 MIB2Q96AX9 1013 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 OXNAD1Q96HP4 312 aaPredicted RBP15.2■□□□□ 0.02
TRA2A-203ENST00000448549 MRGPRX2Q96LB1 330 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 RUFY1Q96T51 708 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 MAP3K3Q99759 626 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 ZCCHC2Q9C0B9 1178 aaKnown RBP15.2■□□□□ 0.02
TRA2A-203ENST00000448549 ACTL8Q9H568 366 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 NHEJ1Q9H9Q4 299 aaPredicted RBP15.2■□□□□ 0.02
TRA2A-203ENST00000448549 ABHD10Q9NUJ1 306 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 IMP3Q9NV31 184 aaKnown RBP15.2■□□□□ 0.02
TRA2A-203ENST00000448549 KLHL8Q9P2G9 620 aaPredicted RBP15.2■□□□□ 0.02
TRA2A-203ENST00000448549 MAN2B2Q9Y2E5 1009 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 COL12A1Q99715 3063 aa15.2■□□□□ 0.02
TRA2A-203ENST00000448549 PTPN13Q12923 2485 aa15.19■□□□□ 0.02
TRA2A-203ENST00000448549 NAV2Q8IVL1 2488 aa15.19■□□□□ 0.02
TRA2A-203ENST00000448549 C21orf140B9A014 251 aa15.19■□□□□ 0.02
TRA2A-203ENST00000448549 SPOPO43791 374 aa15.19■□□□□ 0.02
TRA2A-203ENST00000448549 DNAJB5O75953 348 aa15.19■□□□□ 0.02
TRA2A-203ENST00000448549 RECKO95980 971 aa15.19■□□□□ 0.02
TRA2A-203ENST00000448549 PBLDP30039 288 aaPredicted RBP15.19■□□□□ 0.02
TRA2A-203ENST00000448549 ARL4DP49703 201 aa15.19■□□□□ 0.02
TRA2A-203ENST00000448549 PMS2P54278 862 aa15.19■□□□□ 0.02
TRA2A-203ENST00000448549 TRIM14Q14142 442 aa15.19■□□□□ 0.02
TRA2A-203ENST00000448549 PTPRCAPQ14761 206 aa15.19■□□□□ 0.02
TRA2A-203ENST00000448549 SLC1A5Q15758 541 aa15.19■□□□□ 0.02
TRA2A-203ENST00000448549 TAZQ16635 292 aa15.19■□□□□ 0.02
TRA2A-203ENST00000448549 DNTTIP2Q5QJE6 756 aaKnown RBP15.19■□□□□ 0.02
TRA2A-203ENST00000448549 FNBP1LQ5T0N5 605 aa15.19■□□□□ 0.02
TRA2A-203ENST00000448549 PID1Q7Z2X4 250 aa15.19■□□□□ 0.02
TRA2A-203ENST00000448549 GLT6D1Q7Z4J2 308 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms