RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 PGLSO95336 258 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 LDOC1O95751 146 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-204ENST00000448183 BRCC3P46736 316 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 CDH12P55289 794 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 RGS8P57771 180 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-204ENST00000448183 TAS2R39P59534 338 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 CACNG1Q06432 222 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 MERTKQ12866 999 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 RAPSNQ13702 412 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 VGLL4Q14135 290 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 PRKD1Q15139 912 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-204ENST00000448183 TEAD4Q15561 434 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 TSTD2Q5T7W7 516 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 ERI1Q8IV48 349 aaKnown RBP7.7□□□□□ -1.18
NEDD9-204ENST00000448183 MINDY2Q8NBR6 621 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 RFKQ969G6 155 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 ART5Q96L15 291 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 KCNN2Q9H2S1 579 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 EIF2B3Q9NR50 452 aaKnown RBP7.7□□□□□ -1.18
NEDD9-204ENST00000448183 ZDHHC18Q9NUE0 388 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 FAM105AQ9NUU6 356 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 RAI2Q9Y5P3 530 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 CNTNAP1P78357 1384 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 H3BM21 787 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 MAGEB3O15480 346 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 CCNB2O95067 398 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 ALDH4A1P30038 563 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 RPIAP49247 311 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 RAB2AP61019 212 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 MXD1Q05195 221 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 DLG1Q12959 904 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 TUSC3Q13454 348 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 GRB14Q14449 540 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 TARBP2Q15633 366 aaKnown RBP7.7□□□□□ -1.18
NEDD9-204ENST00000448183 USP41Q3LFD5 358 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 CERS5Q8N5B7 392 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 BEND7Q8N7W2 519 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-204ENST00000448183 OR6K2Q8NGY2 324 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 NSMCE3Q96MG7 304 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 GFM1Q96RP9 751 aaKnown RBP7.7□□□□□ -1.18
NEDD9-204ENST00000448183 EBF4Q9BQW3 602 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 TMEM27Q9HBJ8 222 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 TAS2R7Q9NYW3 318 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 RBM7Q9Y580 266 aaKnown RBP7.7□□□□□ -1.18
NEDD9-204ENST00000448183 SMIM28A0A1B0GU29 152 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 TOR1BO14657 336 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 EI24O14681 340 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 SLC7A4O43246 635 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 HCN1O60741 890 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 SNHG28P0DPA3 235 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 HTR1BP28222 390 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 NMBRP28336 390 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 CCNFP41002 786 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 ZNF132P52740 706 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 ARPC4P59998 168 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 NAE1Q13564 534 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 GTF2H2Q13888 395 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 IKBKEQ14164 716 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 CBX2Q14781 532 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-204ENST00000448183 LARS2Q15031 903 aaKnown RBP7.7□□□□□ -1.18
NEDD9-204ENST00000448183 HERC3Q15034 1050 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 TOMM20Q15388 145 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.7□□□□□ -1.18
NEDD9-204ENST00000448183 FAM46CQ5VWP2 391 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 GTF2H2CQ6P1K8 395 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 TRMT10BQ6PF06 316 aaKnown RBP7.7□□□□□ -1.18
NEDD9-204ENST00000448183 USP30Q70CQ3 517 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 PEX5LQ8IYB4 626 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 CFAP52Q8N1V2 620 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 C1orf127Q8N9H9 656 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 PHC3Q8NDX5 983 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 OR10H5Q8NGA6 315 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 OR5K1Q8NHB7 308 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 SPATA22Q8NHS9 363 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 DQX1Q8TE96 717 aaKnown RBP7.7□□□□□ -1.18
NEDD9-204ENST00000448183 SLC13A3Q8WWT9 602 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 IRGQQ8WZA9 623 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 FERD3LQ96RJ6 166 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 FTHL17Q9BXU8 183 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 TNKS2Q9H2K2 1166 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 ANKRA2Q9H9E1 313 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 KIAA1522Q9P206 1035 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-204ENST00000448183 MAP4K5Q9Y4K4 846 aa7.7□□□□□ -1.18
NEDD9-204ENST00000448183 PCP4L1A6NKN8 68 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 C2CD4BA6NLJ0 364 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 ADM5C9JUS6 153 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 hCG_2039718K7EN88 272 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 MATN3O15232 486 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 SLC22A1O15245 554 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 PRODHO43272 600 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 C22orf31O95567 290 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 CHRNB2P17787 502 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 SPAM1P38567 509 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 ALDH3A2P51648 485 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 TUBA4AP68366 448 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 DSC2Q02487 901 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 EVX2Q03828 476 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 MPPE1Q53F39 396 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 IFI44LQ53G44 452 aa7.69□□□□□ -1.18
NEDD9-204ENST00000448183 USP43Q70EL4 1123 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms