RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 ATP5F1P24539 256 aaPredicted RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 KCNK10P57789 538 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 SLC26A5P58743 744 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 SLC25A3Q00325 362 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 ASAH1Q13510 395 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 ERV3-1Q14264 604 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 LCN8Q6JVE9 175 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 BBS12Q6ZW61 710 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 TRIM46Q7Z4K8 759 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 PHF12Q96QT6 1004 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 AGAP2Q99490 1192 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 APBA2Q99767 749 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 SPRTNQ9H040 489 aaPredicted RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 FAM49AQ9H0Q0 323 aaPredicted RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 CASS4Q9NQ75 786 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 SEMA3GQ9NS98 782 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 CUEDC1Q9NWM3 386 aaPredicted RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 EPHA6Q9UF33 1036 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 PCDHB7Q9Y5E2 793 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 NAP1L6A6NFF2 107 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 G3V2T6 193 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 UBDO15205 165 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 ERN1O75460 977 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 IFNA2P01563 188 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 OPN1MWP04001 364 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 PLA2G4BP0C869 781 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 OPN1MW2P0DN77 364 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 OPN1MW3P0DN78 364 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 MAPTP10636 758 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 RAC2P15153 192 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 CD44P16070 742 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 SLC2A5P22732 501 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 LCN1P31025 176 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 ABATP80404 500 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 SF3A3Q12874 501 aaKnown RBP eCLIP2.89□□□□□ -1.95
CHD9-203ENST00000447540 GCKRQ14397 625 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 ALKBH2Q6NS38 261 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 RFWD3Q6PCD5 774 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 C5orf46Q6UWT4 87 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 SLITRK4Q8IW52 837 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 CADM2Q8N3J6 435 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 PCDH20Q8N6Y1 951 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 ZNF680Q8NEM1 530 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 XAGE3Q8WTP9 111 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 BTN2A3PQ96KV6 586 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 TMED9Q9BVK6 235 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 NANSQ9NR45 359 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 ARMCX1Q9P291 453 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 KIF13BQ9NQT8 1826 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 C6orf229H3BNL8 230 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 ENPP3O14638 875 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 MSH4O15457 936 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 PI15O43692 258 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 PCDHGA12O60330 932 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 HPGDP15428 266 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 CSTF1Q05048 431 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 MGAT5BQ3V5L5 792 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 C6orf141Q5SZD1 244 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 LRRC55Q6ZSA7 311 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 TAC4Q86UU9 113 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 ZNF565Q8N9K5 539 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 ZNF606Q8WXB4 792 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 ST8SIA4Q92187 359 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 KCTD12Q96CX2 325 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 MRPL48Q96GC5 212 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 TRNT1Q96Q11 434 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 AIF1LQ9BQI0 150 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 CCM2Q9BSQ5 444 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 MRI1Q9BV20 369 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 SPNS1Q9H2V7 528 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 AKIP1Q9NQ31 210 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 HEBP1Q9NRV9 189 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 SPANXA1Q9NS26 97 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 LEF1Q9UJU2 399 aaPredicted RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 SNCAIPQ9Y6H5 919 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 TRAV6A0A075B6T7 132 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 NT5C1B-RDH14C9J2C7 533 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 E7ESA3 106 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 MRASO14807 208 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 GSTA4O15217 222 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 PLIN3O60664 434 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 CPNE3O75131 537 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 GH1P01241 217 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 MT-ND1P03886 318 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 IL1RNP18510 177 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 ATP5OP48047 213 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 RAP2BP61225 183 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 GBE1Q04446 702 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 TEAD4Q15561 434 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 SLC22A10Q63ZE4 541 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 CEP68Q76N32 757 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 MRPL52Q86TS9 123 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 TAGAPQ8N103 731 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 MIER2Q8N344 545 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 RASGEF1AQ8N9B8 481 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 RDM1Q8NG50 284 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 MOSPD2Q8NHP6 518 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 SHKBP1Q8TBC3 707 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 ZNF431Q8TF32 576 aaPredicted RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 RBPMSQ93062 196 aaKnown RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms