RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 A0A1W2PQM1 296 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 FAM187AA6NFU0 413 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 MGAT4DA6NG13 374 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 SMAPO00193 183 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 PPM1DO15297 605 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 TTI1O43156 1089 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 MLNP12872 115 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 RPL10P27635 214 aaKnown RBP16.09■□□□□ 0.17
SF3A1-204ENST00000447376 RBMS1P29558 406 aaKnown RBP16.09■□□□□ 0.17
SF3A1-204ENST00000447376 CTSCP53634 463 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 EPHA4P54764 986 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 GABREP78334 506 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 DMPKQ09013 629 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 BCL7AQ4VC05 210 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 FASTKD1Q53R41 847 aaKnown RBP16.09■□□□□ 0.17
SF3A1-204ENST00000447376 C3orf38Q5JPI3 329 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 PHF19Q5T6S3 580 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 AGAP9Q5VTM2 703 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 FOXR1Q6PIV2 292 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 WASH2PQ6VEQ5 465 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 CERS6Q6ZMG9 384 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 HOOK3Q86VS8 718 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 MDM1Q8TC05 714 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 TMEM159Q96B96 161 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 ATXN7L3BQ96GX2 97 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 LIN37Q96GY3 246 aaPredicted RBP16.09■□□□□ 0.17
SF3A1-204ENST00000447376 WASH6PQ9NQA3 447 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 POT1Q9NUX5 634 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 SLC23A2Q9UGH3 650 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 ACSL5Q9ULC5 683 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 ENTPD2Q9Y5L3 495 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 PLXNB3Q9ULL4 1909 aa16.09■□□□□ 0.17
SF3A1-204ENST00000447376 ARHGEF17Q96PE2 2063 aaPredicted RBP16.09■□□□□ 0.17
SF3A1-204ENST00000447376 A6NCN8 305 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 DNALI1O14645 258 aaPredicted RBP16.08■□□□□ 0.16
SF3A1-204ENST00000447376 PFDN6O15212 129 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 AP2A2O94973 939 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 GSTM1P09488 218 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 SLC35G4P0C7Q5 338 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 XRCC1P18887 633 aaPredicted RBP16.08■□□□□ 0.16
SF3A1-204ENST00000447376 CCKBRP32239 447 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 NSG1P42857 185 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 MAPK9P45984 424 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 LSSP48449 732 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 DRG2P55039 364 aaKnown RBP16.08■□□□□ 0.16
SF3A1-204ENST00000447376 B4GALNT1Q00973 533 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 GSTM4Q03013 218 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 C2orf54Q08AI8 447 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 ITIH4Q14624 930 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.08■□□□□ 0.16
SF3A1-204ENST00000447376 CASC4Q6P4E1 433 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 ABRAXAS1Q6UWZ7 409 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 C11orf96Q7Z7L8 435 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 BBOF1Q8ND07 529 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 OR2L2Q8NH16 312 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 OR4L1Q8NH43 312 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 HDAC10Q969S8 669 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 CMKLR1Q99788 373 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 TSSK1BQ9BXA7 367 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 ZMIZ1Q9ULJ6 1067 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 ATXN7L1Q9ULK2 861 aaPredicted RBP16.08■□□□□ 0.16
SF3A1-204ENST00000447376 ACACBO00763 2458 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 CHD8Q9HCK8 2581 aa16.08■□□□□ 0.16
SF3A1-204ENST00000447376 IGHV1OR21-1A0A087WYE8 117 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 TRBV5-4A0A0C4DH59 114 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 TCRBV7S3A2A0A539 114 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 MAGEB16A2A368 324 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 CCDC162PA2VCL2 907 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 SDR42E2A6NKP2 422 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 EFCAB8A8MWE9 144 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 EML2O95834 649 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 FTH1P02794 183 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 MPOP05164 745 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 JMJD7P0C870 316 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 PAMP19021 973 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 PRLHRP49683 370 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 KRT33BQ14525 404 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 MORF4L2Q15014 288 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 ANKRD22Q5VYY1 191 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 IZUMO3Q5VZ72 239 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 PROSER1Q86XN7 944 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 OTUD6BQ8N6M0 293 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 NAT8LQ8N9F0 302 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 OR13J1Q8NGT2 312 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 HM13Q8TCT9 377 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 SNF8Q96H20 258 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 LINC00615Q96LM1 132 aaPredicted RBP16.07■□□□□ 0.16
SF3A1-204ENST00000447376 CCM2Q9BSQ5 444 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 FOXP3Q9BZS1 431 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 RDH14Q9HBH5 336 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 CHRAC1Q9NRG0 131 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 THSD1Q9NS62 852 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 FAM8A1Q9UBU6 413 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 SATB2Q9UPW6 733 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 MRFAP1Q9Y605 127 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 MYLKQ15746 1914 aa16.07■□□□□ 0.16
SF3A1-204ENST00000447376 ASXL3Q9C0F0 2248 aa16.06■□□□□ 0.16
SF3A1-204ENST00000447376 RP1P56715 2156 aa16.06■□□□□ 0.16
SF3A1-204ENST00000447376 C17orf113A0A1B0GUU1 675 aa16.06■□□□□ 0.16
SF3A1-204ENST00000447376 LILRA5A6NI73 299 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms