RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 NRG1Q02297 640 aaPredicted RBP7.79□□□□□ -1.16
SMG1-202ENST00000446231 HSDL1Q3SXM5 330 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 TTLL9Q3SXZ7 439 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 ANKS3Q6ZW76 656 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 TAF8Q7Z7C8 310 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 UFD1Q92890 307 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 WNT8BQ93098 351 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 PRAMEF33A0A0G2JMD5 474 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 C2CD4BA6NLJ0 364 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 PRAMEF10O60809 474 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 CPOXP36551 454 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 DCDC1P59894 354 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 MARC1Q5VT66 337 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 EDEM1Q92611 657 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 CREB3L1Q96BA8 519 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 NTN4Q9HB63 628 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 NPEPPSL1A6NEC2 478 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 LRCH4O75427 683 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 CYP20A1Q6UW02 462 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 C14orf80Q86SX3 495 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 VANGL1Q8TAA9 524 aaPredicted RBP7.79□□□□□ -1.16
SMG1-202ENST00000446231 GLOD4Q9HC38 313 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 MAP10Q9P2G4 905 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 TMEM94Q12767 1356 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 BNIP3LO60238 219 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 SNRPD2P62316 118 aaKnown RBP7.79□□□□□ -1.16
SMG1-202ENST00000446231 Q8N9G6 341 aaPredicted RBP7.79□□□□□ -1.16
SMG1-202ENST00000446231 TXNDC5Q8NBS9 432 aaKnown RBP7.79□□□□□ -1.16
SMG1-202ENST00000446231 MAELQ96JY0 434 aaKnown RBP7.79□□□□□ -1.16
SMG1-202ENST00000446231 TMEM134Q9H6X4 195 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 CACNA1EQ15878 2313 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 ESPL1Q14674 2120 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 RIC1Q4ADV7 1423 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 PLOD2O00469 737 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 AP3D1O14617 1153 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 GRK4P32298 578 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 TWF1Q12792 350 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 AP5B1Q2VPB7 878 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 SV2CQ496J9 727 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 ALFQ53S48 1182 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 LZTR1Q8N653 840 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 CNDP2Q96KP4 475 aaKnown RBP7.79□□□□□ -1.16
SMG1-202ENST00000446231 ARHGEF4Q9NR80 690 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 RPL36Q9Y3U8 105 aaKnown RBP7.79□□□□□ -1.16
SMG1-202ENST00000446231 POLR3HQ9Y535 204 aaPredicted RBP7.79□□□□□ -1.16
SMG1-202ENST00000446231 A0A1W2PP18 115 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 PIP5K1BO14986 540 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 AP3S2P59780 193 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 APOBEC3HQ6NTF7 200 aaKnown RBP7.79□□□□□ -1.16
SMG1-202ENST00000446231 AP2M1Q96CW1 435 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 KCNC2Q96PR1 638 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 HSFX1Q9UBD0 423 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 LOC100130705A0A1B0GUX0 176 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 ACOX3O15254 700 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 ICAM3P32942 547 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 FAM174BQ3ZCQ3 159 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 KIAA1614Q5VZ46 1190 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 RNASE11Q8TAA1 199 aaKnown RBP7.79□□□□□ -1.16
SMG1-202ENST00000446231 NACC2Q96BF6 587 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 POLLQ9UGP5 575 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 CDH7Q9ULB5 785 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 UGT2A1Q9Y4X1 527 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 SULT1C4O75897 302 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 C4BPAP04003 597 aaKnown RBP7.79□□□□□ -1.16
SMG1-202ENST00000446231 UROSP10746 265 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 HSD17B12Q53GQ0 312 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 TXNRD3Q86VQ6 643 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 SCAF8Q9UPN6 1271 aaKnown RBP7.79□□□□□ -1.16
SMG1-202ENST00000446231 DHRS7Q9Y394 339 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 KPNA3O00505 521 aaPredicted RBP7.79□□□□□ -1.16
SMG1-202ENST00000446231 KLHL18O94889 574 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 NMBRP28336 390 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 OGDHQ02218 1023 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 C10orf120Q5SQS8 335 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 MASTLQ96GX5 879 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 ZSWIM3Q96MP5 696 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 ADGRE3Q9BY15 652 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 ANGPT4Q9Y264 503 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 CXorf57Q6NSI4 855 aaKnown RBP7.79□□□□□ -1.16
SMG1-202ENST00000446231 LCLAT1Q6UWP7 414 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 LYSMD3Q7Z3D4 306 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 TMEM209Q96SK2 561 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 COMMD9Q9P000 198 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 KLQ9UEF7 1012 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 CLEC4AQ9UMR7 237 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 CMAHPQ9Y471 501 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 SPATA31A3Q5VYP0 1347 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 ACSM2AQ08AH3 577 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 ACSM2BQ68CK6 577 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 ZDHHC15Q96MV8 337 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 GPN1Q9HCN4 374 aaPredicted RBP7.79□□□□□ -1.16
SMG1-202ENST00000446231 ERAP1Q9NZ08 941 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 MAN2B2Q9Y2E5 1009 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 FSTL5Q8N475 847 aaPredicted RBP7.79□□□□□ -1.16
SMG1-202ENST00000446231 BTN2A2Q8WVV5 523 aa7.79□□□□□ -1.16
SMG1-202ENST00000446231 SAMD4AQ9UPU9 718 aaKnown RBP7.79□□□□□ -1.16
SMG1-202ENST00000446231 PGK1P00558 417 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 CYBBP04839 570 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 CYP4F8P98187 520 aa7.78□□□□□ -1.16
SMG1-202ENST00000446231 TSTQ16762 297 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms